RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PLD4Q96BZ4 506 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 TRIM4Q9C037 500 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SEMA4AQ9H3S1 761 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 APOBEC3GQ9HC16 384 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SELENONQ9NZV5 590 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SAE1Q9UBE0 346 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 FAF1Q9UNN5 650 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 C4AP0C0L4 1744 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 MYO1CO00159 1063 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 ERVK-10P10266 1014 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 KCNE1P15382 129 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 RHOQP17081 205 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SYN1P17600 705 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 ITGB6P18564 788 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 TACR2P21452 398 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 JAM2P57087 298 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 YBEYP58557 167 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 KDSRQ06136 332 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 PRKAA1Q13131 559 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 TP53BP2Q13625 1128 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 BMPR2Q13873 1038 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 ARID3BQ8IVW6 561 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 LEMD2Q8NC56 503 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 ANKRD7Q92527 254 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 TUBGCP3Q96CW5 907 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 CCT8L2Q96SF2 557 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 GPR88Q9GZN0 384 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 MINDY3Q9H8M7 445 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 PIH1D1Q9NWS0 290 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 MPP6Q9NZW5 540 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 PCYOX1Q9UHG3 505 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 EFR3BQ9Y2G0 817 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 COL22A1Q8NFW1 1626 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 QSOX1O00391 747 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 FSCN2O14926 492 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 ACSL4O60488 711 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 NOL4O94818 638 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 PRKAA2P54646 552 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 PRKCQQ04759 706 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 CCDC157Q569K6 752 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 DOK6Q6PKX4 331 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 C11orf96Q7Z7L8 435 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 OR52K1Q8NGK4 314 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 MAGEC3Q8TD91 643 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SERAC1Q96JX3 654 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 ACTR8Q9H981 624 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 TMBIM4Q9HC24 238 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 APPL1Q9UKG1 709 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 EVPLLA8MZ36 301 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 CYP1A1P04798 512 aaPredicted RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 CTSEP14091 401 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 RPL17P18621 184 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 FLT3P36888 993 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 HPCAP84074 193 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 INPP5AQ14642 412 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 PHKG1Q16816 387 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 CCDC153Q494R4 210 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 LYPLAL1Q5VWZ2 237 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 SYTL1Q8IYJ3 562 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 RNF168Q8IYW5 571 aaPredicted RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 EIF1ADQ8N9N8 165 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 CCDC3Q9BQI4 270 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 CYP4F12Q9HCS2 524 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 NINJ2Q9NZG7 142 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 THEGQ9P2T0 379 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 FGF1P05230 155 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 RPL22P35268 128 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 ASPAP45381 313 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 DAOAP59103 153 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 AFTPHQ6ULP2 937 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 TRAPPC5Q8IUR0 188 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 RFWD2Q8NHY2 731 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 ZNF473Q8WTR7 871 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 KCNK16Q96T55 309 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 ELOVL6Q9H5J4 265 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 C10orf88Q9H8K7 445 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 SPATS2LQ9NUQ6 558 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 KIF17Q9P2E2 1029 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 VPS51Q9UID3 782 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 NHSQ6T4R5 1651 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 A8MX80 341 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 DNTTP04053 509 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 HLA-DPA1P20036 260 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 SSTR1P30872 391 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 LSP1P33241 339 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 PGM1P36871 562 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 MAGEA9P43362 315 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 ANXA11P50995 505 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 AP2B1P63010 937 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 CDK18Q07002 472 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 TRIP4Q15650 581 aaPredicted RBP9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 AADACL2Q6P093 401 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 FBXL18Q96ME1 805 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 RBBP8Q99708 897 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 C16orf70Q9BSU1 422 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 ASB8Q9H765 288 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 SCOCQ9UIL1 159 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 RAB23Q9ULC3 237 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 ADAMTS5Q9UNA0 930 aa9.59□□□□□ -0.87
CLTCL1-208ENST00000615606 PTPRJQ12913 1337 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms