RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 GRAMD1AQ96CP6 724 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ZNF333Q96JL9 665 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 IL22Q9GZX6 179 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 UGT1A7Q9HAW7 530 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 UGT1A10Q9HAW8 530 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 UGT1A8Q9HAW9 530 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 HSFX1Q9UBD0 423 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 CARNS1A5YM72 827 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ADRA1DP25100 572 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 NEK3P51956 506 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 GEMP55040 296 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 CORO7P57737 925 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 BMPR2Q13873 1038 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 RNF187Q5TA31 235 aaPredicted RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 TPGS2Q68CL5 300 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 FBXL22Q6P050 247 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 CCDC121Q6ZUS5 278 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 SH2D5Q6ZV89 423 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 RASSF3Q86WH2 238 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 CHSY1Q86X52 802 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ZNF276Q8N554 614 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ZNF669Q96BR6 464 aaPredicted RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 CERS2Q96G23 380 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 PITPNM3Q9BZ71 974 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 NACA2Q9H009 215 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 RBM22Q9NW64 420 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 UBP1Q9NZI7 540 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ZFATQ9P243 1243 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 USP15Q9Y4E8 981 aaPredicted RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 MRPL42Q9Y6G3 142 aaKnown RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 NYNRINQ9P2P1 1898 aaKnown RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 USP1O94782 785 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ATP5C1P36542 298 aaKnown RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 DNAJC3Q13217 504 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 FRG1Q14331 258 aaKnown RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 SPATA21Q7Z572 469 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 UNC5BQ8IZJ1 945 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 SLC39A11Q8N1S5 342 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 ZNF461Q8TAF7 563 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 FATE1Q969F0 183 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 VWCEQ96DN2 955 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 RPRD1AQ96P16 312 aaPredicted RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 APOL2Q9BQE5 337 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 CLSTN3Q9BQT9 956 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 NOL6Q9H6R4 1146 aaKnown RBP11.67□□□□□ -0.54
LINC01278-204ENST00000609143 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 TXNDC16Q9P2K2 825 aa11.67□□□□□ -0.54
LINC01278-204ENST00000609143 LTBP2Q14767 1821 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 COL4A6Q14031 1691 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 FAM237BA0A1B0GVD1 139 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 DRGXA6NNA5 263 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 EFCAB14O75071 495 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 LAG3P18627 525 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 CCNFP41002 786 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 DSG1Q02413 1049 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
LINC01278-204ENST00000609143 ALFQ53S48 1182 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 MROH9Q5TGP6 573 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 FAM117BQ6P1L5 589 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 TMEM135Q86UB9 458 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 ZNF689Q96CS4 500 aaPredicted RBP11.66□□□□□ -0.54
LINC01278-204ENST00000609143 TBL1YQ9BQ87 522 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 HERC2P3Q9BVR0 1158 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 VPS11Q9H270 941 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 C11orf49Q9H6J7 331 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 MKS1Q9NXB0 559 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 SLC17A7Q9P2U7 560 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 GRID1Q9ULK0 1009 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 DOCK4Q8N1I0 1966 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 ANKRD65E5RJM6 399 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 ATP9BO43861 1147 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 RFPL1O75677 317 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 CNTN5O94779 1100 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 ABLIM3O94929 683 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 OAS1P00973 400 aaKnown RBP11.66□□□□□ -0.54
LINC01278-204ENST00000609143 HLA-DQB2P05538 268 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 RENBPP51606 427 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 HNRNPDQ14103 355 aaKnown RBP11.66□□□□□ -0.54
LINC01278-204ENST00000609143 TAF12Q16514 161 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 CERCAMQ5T4B2 595 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 SNX30Q5VWJ9 437 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 FAM47EQ6ZV65 393 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC01278-204ENST00000609143 SPATA22Q8NHS9 363 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 NSMCE1Q8WV22 266 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 IGSF8Q969P0 613 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 HMCESQ96FZ2 354 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 SRPK1Q96SB4 655 aaKnown RBP11.66□□□□□ -0.54
LINC01278-204ENST00000609143 PLCD4Q9BRC7 762 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 SP110Q9HB58 689 aa11.66□□□□□ -0.54
LINC01278-204ENST00000609143 URODP06132 367 aa11.65□□□□□ -0.54
LINC01278-204ENST00000609143 ALDH1A3P47895 512 aa11.65□□□□□ -0.54
LINC01278-204ENST00000609143 MAPKAPK2P49137 400 aa11.65□□□□□ -0.54
LINC01278-204ENST00000609143 SF3A3Q12874 501 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC01278-204ENST00000609143 ANKRD20A4Q4UJ75 823 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms