RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 RXRGP48443 463 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 ARRB1P49407 418 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 CLDN6P56747 220 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 SNX16P57768 344 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 MTA1Q13330 715 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 STAT4Q14765 748 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 C5orf22Q49AR2 442 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 Q6ZVU0 165 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 SLC47A2Q86VL8 602 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 PIP4K2CQ8TBX8 421 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 ERVMER34-1Q9H9K5 563 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 AJAP1Q9UKB5 411 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 TBC1D30Q9Y2I9 924 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 NYNRINQ9P2P1 1898 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 LAMA5O15230 3695 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 ALOX15BO15296 676 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 MAGEC1O60732 1142 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 DAB1O75553 588 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 RFPL3O75679 317 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 CNTN5O94779 1100 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 ADCY5O95622 1261 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 MT-CO1P00395 513 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 C1SP09871 688 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 PNMA6AP0CW24 399 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 SRCP12931 536 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 CDH4P55283 916 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 RNASE9P60153 205 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 PTPN20Q4JDL3 420 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 AGBL4Q5VU57 503 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 SLC26A9Q7LBE3 791 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 OXR1Q8N573 874 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 ZNF397Q8NF99 534 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 MUC3BQ9H195 1237 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 SYNCQ9H7C4 482 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 ANLNQ9NQW6 1124 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 ARID1BQ8NFD5 2236 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 COL5A1P20908 1838 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-219ENST00000608621 E9PAM4 449 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 SNAP91O60641 907 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 CDK4P11802 303 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 NUDT1P36639 197 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 CXCR3P49682 368 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 ACADVLP49748 655 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 TAS2R38P59533 333 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 KRT83P78385 493 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 TPD52L1Q16890 204 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 SOWAHCQ53LP3 525 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 ALFQ53S48 1182 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 OTUD1Q5VV17 481 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 KANSL1Q7Z3B3 1105 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 TRIM69Q86WT6 500 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 ATP11CQ8NB49 1132 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 TSC1Q92574 1164 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 PSMB7Q99436 277 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 NPY6RQ99463 290 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 PIGVQ9NUD9 493 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 RRN3Q9NYV6 651 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 SNX10Q9Y5X0 201 aa13.73□□□□□ -0.21
POLR2J3-219ENST00000608621 DRGXA6NNA5 263 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 PRAMEF26H0Y7S4 382 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 I6L893 689 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 K7ERQ8 282 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 SLC31A1O15431 190 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 RNGTTO60942 597 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 CTSLP07711 333 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 RHOCP08134 193 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 CHRNA3P32297 505 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 HNF1BP35680 557 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 SULT1E1P49888 294 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 BPIFB4P59827 614 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 DEUP1Q05D60 604 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 OVGP1Q12889 678 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 SETMARQ53H47 684 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 BRMS1LQ5PSV4 323 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 SFMBT2Q5VUG0 894 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 FAM71AQ8IYT1 594 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 MLKLQ8NB16 471 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 OR2A12Q8NGT7 310 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 KLK6Q92876 244 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 KLHDC7BQ96G42 594 aa13.72□□□□□ -0.21
POLR2J3-219ENST00000608621 PDCL3Q9H2J4 239 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms