RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 VANGL2Q9ULK5 521 aa20.78■□□□□ 0.92
PPFIA3-204ENST00000602492 PPM1HQ9ULR3 514 aa20.78■□□□□ 0.92
PPFIA3-204ENST00000602492 BPTFQ12830 3046 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 MCF2LO15068 1137 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 GRAP2O75791 330 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 TARDBPQ13148 414 aaKnown RBP eCLIP20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 ILKQ13418 452 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 NFKBIBQ15653 356 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 POM121L1PQ3SYA9 428 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 SETMARQ53H47 684 aaPredicted RBP20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 FBXL19Q6PCT2 694 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 TRIM65Q6PJ69 517 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 Q6ZVU0 165 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 PIP4K2CQ8TBX8 421 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 BBC3Q96PG8 261 aaPredicted RBP20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 NOX5Q96PH1 765 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 HELZ2Q9BYK8 2649 aaKnown RBP20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 PTPRQQ9UMZ3 2332 aa20.77■□□□□ 0.92
PPFIA3-204ENST00000602492 BECN2A8MW95 431 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 CLDN11O75508 207 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 CKMT2P17540 419 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 IRAK1P51617 712 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 UBE2HP62256 183 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 SEMG2Q02383 582 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 NME3Q13232 169 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 OR6B2Q6IFH4 312 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 C11orf57Q6ZUT1 292 aaPredicted RBP20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 KANSL1Q7Z3B3 1105 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 PASD1Q8IV76 773 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 WDTC1Q8N5D0 677 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 OR52K2Q8NGK3 314 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 CRELD1Q96HD1 420 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 PREBQ9HCU5 417 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 APEX2Q9UBZ4 518 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 HS3ST4Q9Y661 456 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 AK5Q9Y6K8 562 aa20.76■□□□□ 0.91
PPFIA3-204ENST00000602492 PRAMEF26H0Y7S4 382 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 BNIP3LO60238 219 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 GGCXP38435 758 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 SNX16P57768 344 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 GBP6Q6ZN66 633 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 FAM183BPQ6ZVS7 135 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 SH2D3CQ8N5H7 860 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 SHC3Q92529 594 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 NRSN2Q9GZP1 204 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 MUC3BQ9H195 1237 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 LMBRD1Q9NUN5 540 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 PCDHGC3Q9UN70 934 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 OR51B4Q9Y5P0 310 aa20.75■□□□□ 0.91
PPFIA3-204ENST00000602492 KALRNO60229 2985 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 PAGE1O75459 146 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 DAB1O75553 588 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 MBD3O95983 291 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 SLC9A1P19634 815 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 CDH4P55283 916 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 OLFML1Q6UWY5 402 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 LRRC69Q6ZNQ3 347 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 C14orf80Q86SX3 495 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 CREBRFQ8IUR6 639 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 KLHDC7BQ96G42 594 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 CCDC114Q96M63 670 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 SIK2Q9H0K1 926 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 SYNCQ9H7C4 482 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 CA5BQ9Y2D0 317 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 TBC1D30Q9Y2I9 924 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 FARP1Q9Y4F1 1045 aaPredicted RBP20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 DOCK9Q9BZ29 2069 aa20.74■□□□□ 0.91
PPFIA3-204ENST00000602492 M0QYT0 321 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 RNGTTO60942 597 aaKnown RBP20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 SDC3O75056 442 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 NOS2P35228 1153 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 KRT83P78385 493 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 APBA1Q02410 837 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 PTK2Q05397 1052 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 CCDC15Q0P6D6 951 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 RTP5Q14D33 572 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 EXOC3L4Q17RC7 722 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 SKOR2Q2VWA4 1001 aaPredicted RBP20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 C5orf22Q49AR2 442 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 SLC26A9Q7LBE3 791 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 C1orf131Q8NDD1 294 aaKnown RBP20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 HS3ST2Q9Y278 367 aa20.73■□□□□ 0.91
PPFIA3-204ENST00000602492 KPNA3O00505 521 aaPredicted RBP20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 RRP8O43159 456 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 TLX3O43711 291 aaPredicted RBP20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 ERBB2P04626 1255 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 SRCP12931 536 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 ACP1P24666 158 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 ITPKBP27987 946 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 KRT9P35527 623 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 EIF2S3P41091 472 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 TAS2R38P59533 333 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 SLC6A3Q01959 620 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 PROX2Q3B8N5 592 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 PIP5KL1Q5T9C9 394 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 NEK5Q6P3R8 708 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 ATP11CQ8NB49 1132 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 TMEM145Q8NBT3 493 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 RFFLQ8WZ73 363 aa20.72■□□□□ 0.91
PPFIA3-204ENST00000602492 UBL7Q96S82 380 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms