RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CNTN5O94779 1100 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 ITGAVP06756 1048 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 CYP11B1P15538 503 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 TFE3P19532 575 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-204ENST00000601038 ARRB1P49407 418 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-204ENST00000601038 NXPH1P58417 271 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 KRT83P78385 493 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 KCNMA1Q12791 1236 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 RAPGEF1Q13905 1077 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 SMAD1Q15797 465 aaKnown RBP17.44■□□□□ 0.38
SCAF1-204ENST00000601038 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 ACBD5Q5T8D3 534 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-204ENST00000601038 KLHDC7AQ5VTJ3 777 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 NAPEPLDQ6IQ20 393 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 Q6ZVU0 165 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 TRIM69Q86WT6 500 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 PIP4K2CQ8TBX8 421 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 C1orf74Q96LT6 269 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 MUC3BQ9H195 1237 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 ERVMER34-1Q9H9K5 563 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 ANLNQ9NQW6 1124 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 DKK4Q9UBT3 224 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 LHX6Q9UPM6 363 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 DMTF1Q9Y222 760 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 PAXBP1Q9Y5B6 917 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 GOLGA4Q13439 2230 aaKnown RBP17.44■□□□□ 0.38
SCAF1-204ENST00000601038 SPEGQ15772 3267 aa17.44■□□□□ 0.38
SCAF1-204ENST00000601038 TP53BP1Q12888 1972 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-204ENST00000601038 DRGXA6NNA5 263 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 I6L893 689 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-204ENST00000601038 ZNF18P17022 549 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 RXRGP48443 463 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 SULT1E1P49888 294 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 DEUP1Q05D60 604 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 CNTN1Q12860 1018 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 OVGP1Q12889 678 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 SLC25A52Q3SY17 297 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 ALFQ53S48 1182 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 AGBL4Q5VU57 503 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 LRRC31Q6UY01 552 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 SETD3Q86TU7 594 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-204ENST00000601038 IQCHQ86VS3 1027 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 ERICH1Q86X53 443 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 ZNF683Q8IZ20 524 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 MDM1Q8TC05 714 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 PSMB7Q99436 277 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 C2orf49Q9BVC5 232 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-204ENST00000601038 CHMP5Q9NZZ3 219 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 DACH1Q9UI36 760 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 FARP1Q9Y4F1 1045 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-204ENST00000601038 PCDHGA1Q9Y5H4 931 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 FHOD1Q9Y613 1164 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 KNTC1P50748 2209 aa17.43■□□□□ 0.38
SCAF1-204ENST00000601038 COL5A1P20908 1838 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-204ENST00000601038 MAGEC1O60732 1142 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 LDOC1O95751 146 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-204ENST00000601038 MT-CO1P00395 513 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 RHOCP08134 193 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 SRCP12931 536 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 MAT2AP31153 395 aaKnown RBP17.42■□□□□ 0.38
SCAF1-204ENST00000601038 CAMK2BQ13554 666 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 CCDC157Q569K6 752 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 HSP90AA4PQ58FG1 418 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 FAM102AQ5T9C2 384 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-204ENST00000601038 DHRS13Q6UX07 377 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 XYLT1Q86Y38 959 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 OXR1Q8N573 874 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 ATP11CQ8NB49 1132 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 TBCBQ99426 244 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 NAA15Q9BXJ9 866 aaKnown RBP17.42■□□□□ 0.38
SCAF1-204ENST00000601038 VPS51Q9UID3 782 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 GPSM3Q9Y4H4 160 aa17.42■□□□□ 0.38
SCAF1-204ENST00000601038 PKD1L2Q7Z442 2459 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 IGLV3-10A0A075B6K4 115 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 TRABD2BA6NFA1 517 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 ENC1O14682 589 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 BNIP3LO60238 219 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 SNAP91O60641 907 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 LSM8O95777 96 aaKnown RBP17.41■□□□□ 0.38
SCAF1-204ENST00000601038 C1SP09871 688 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 CDK4P11802 303 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 UCHL3P15374 230 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 EPHA8P29322 1005 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-204ENST00000601038 CCDC15Q0P6D6 951 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 STAT4Q14765 748 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 POM121L1PQ3SYA9 428 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 SETMARQ53H47 684 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-204ENST00000601038 CT47A1Q5JQC4 288 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-204ENST00000601038 TAF3Q5VWG9 929 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 TMPRSS12Q86WS5 348 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 SPATS2Q86XZ4 545 aaKnown RBP17.41■□□□□ 0.38
SCAF1-204ENST00000601038 MARCH9Q86YJ5 346 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 DCAF4L2Q8NA75 395 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 TMIEQ8NEW7 156 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 OR2A12Q8NGT7 310 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 CNDP2Q96KP4 475 aaKnown RBP17.41■□□□□ 0.38
SCAF1-204ENST00000601038 CCDC114Q96M63 670 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 PREBQ9HCU5 417 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 SNX10Q9Y5X0 201 aa17.41■□□□□ 0.38
SCAF1-204ENST00000601038 ZZEF1O43149 2961 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms