RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ETFBP38117 255 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 VASPP50552 380 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-206ENST00000599699 LMNB2Q03252 620 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 MAPK8IP2Q13387 824 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-206ENST00000599699 ERMARDQ5T6L9 678 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 PRR23CQ6ZRP0 262 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 C12orf50Q8NA57 414 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-206ENST00000599699 FRS2Q8WU20 508 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 ARHGEF26Q96DR7 871 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 CCDC42Q96M95 316 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 GPR174Q9BXC1 333 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 NDFIP2Q9NV92 336 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 ANAPC7Q9UJX3 599 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 NEU3Q9UQ49 428 aa28.86■■■□□ 2.21
SSBP4-206ENST00000599699 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.86■■■□□ 2.21
SSBP4-206ENST00000599699 MT-CO1P00395 513 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 ZNF806P0C7X5 589 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 PSMD8P48556 350 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 TPI1P60174 286 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 ZNF33AQ06730 810 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 TBX2Q13207 712 aaPredicted RBP28.85■■■□□ 2.21
SSBP4-206ENST00000599699 ELAVL3Q14576 367 aaKnown RBP28.85■■■□□ 2.21
SSBP4-206ENST00000599699 SF3A2Q15428 464 aaKnown RBP28.85■■■□□ 2.21
SSBP4-206ENST00000599699 CST6Q15828 149 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 RETSATQ6NUM9 610 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 GAS2L3Q86XJ1 694 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 HSPA12BQ96MM6 686 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 PEBP4Q96S96 227 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 CHP1Q99653 195 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 SNRNP25Q9BV90 132 aaKnown RBP28.85■■■□□ 2.21
SSBP4-206ENST00000599699 CATSPERBQ9H7T0 1116 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 HS3ST2Q9Y278 367 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 NCKAP1Q9Y2A7 1128 aa28.85■■■□□ 2.21
SSBP4-206ENST00000599699 PLXND1Q9Y4D7 1925 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 FOXD2O60548 495 aaPredicted RBP28.84■■■□□ 2.21
SSBP4-206ENST00000599699 RAMP2O60895 175 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 LRCH4O75427 683 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 IGLV3-19P01714 112 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 SRCP12931 536 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 ITPKAP23677 461 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 ACVRL1P37023 503 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 SFSWAPQ12872 951 aaKnown RBP28.84■■■□□ 2.21
SSBP4-206ENST00000599699 PIGHQ14442 188 aaPredicted RBP28.84■■■□□ 2.21
SSBP4-206ENST00000599699 ACAP1Q15027 740 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 PLA2G2CQ5R387 149 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 Q6ZVU0 165 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 ZNF354CQ86Y25 554 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 CTNNBL1Q8WYA6 563 aaPredicted RBP28.84■■■□□ 2.21
SSBP4-206ENST00000599699 OR8D1Q8WZ84 308 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 FOXJ1Q92949 421 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 BTBD6Q96KE9 485 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 FAM129BQ96TA1 746 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 PABPC3Q9H361 631 aaKnown RBP28.84■■■□□ 2.21
SSBP4-206ENST00000599699 NHEJ1Q9H9Q4 299 aaPredicted RBP28.84■■■□□ 2.21
SSBP4-206ENST00000599699 IP6K2Q9UHH9 426 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 NENFQ9UMX5 172 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 SCML1Q9UN30 329 aa28.84■■■□□ 2.21
SSBP4-206ENST00000599699 DOCK4Q8N1I0 1966 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 K7ERQ8 282 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 MID1O15344 667 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 IL1BP01584 269 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 ZNF75DP51815 510 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 POLD3Q15054 466 aaPredicted RBP28.83■■■□□ 2.21
SSBP4-206ENST00000599699 CA9Q16790 459 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 ASTE1Q2TB18 679 aaPredicted RBP28.83■■■□□ 2.21
SSBP4-206ENST00000599699 AASDHQ4L235 1098 aaPredicted RBP28.83■■■□□ 2.21
SSBP4-206ENST00000599699 DAB2IPQ5VWQ8 1189 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 DSG4Q86SJ6 1040 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 SYT12Q8IV01 421 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 SLC41A1Q8IVJ1 513 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 RTL3Q8N8U3 475 aaKnown RBP28.83■■■□□ 2.21
SSBP4-206ENST00000599699 MAGEH1Q9H213 219 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 CTTNBP2NLQ9P2B4 639 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 HPCAL4Q9UM19 191 aa28.83■■■□□ 2.21
SSBP4-206ENST00000599699 ATXN2Q99700 1313 aaKnown RBP28.83■■■□□ 2.21
SSBP4-206ENST00000599699 MEI4A8MW99 385 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 MYO1FO00160 1098 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 EEF2KO00418 725 aaKnown RBP28.82■■■□□ 2.2
SSBP4-206ENST00000599699 FGF10O15520 208 aaPredicted RBP28.82■■■□□ 2.2
SSBP4-206ENST00000599699 DAPK3O43293 454 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 SLC8A1P32418 973 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 HTR7P34969 479 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 PCK1P35558 622 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 SEMA3BQ13214 749 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 PPP6R3Q5H9R7 873 aaPredicted RBP28.82■■■□□ 2.2
SSBP4-206ENST00000599699 SYCP2LQ5T4T6 812 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 RGL4Q8IZJ4 473 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 ARHGEF2Q92974 986 aaKnown RBP28.82■■■□□ 2.2
SSBP4-206ENST00000599699 ZNF419Q96HQ0 510 aaPredicted RBP28.82■■■□□ 2.2
SSBP4-206ENST00000599699 CCDC114Q96M63 670 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 OMDQ99983 421 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 PACSIN1Q9BY11 444 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 BTBD1Q9H0C5 482 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 FBXL12Q9NXK8 326 aa28.82■■■□□ 2.2
SSBP4-206ENST00000599699 FARP1Q9Y4F1 1045 aaPredicted RBP28.82■■■□□ 2.2
SSBP4-206ENST00000599699 RALGAPA1Q6GYQ0 2036 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 PRR5-ARHGAP8B1AHC4 643 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 EIF3CLB5ME19 914 aaKnown RBP28.81■■■□□ 2.2
SSBP4-206ENST00000599699 SMAD6O43541 496 aaKnown RBP28.81■■■□□ 2.2
SSBP4-206ENST00000599699 RNASEH2AO75792 299 aaKnown RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms