RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ACE2Q9BYF1 805 aaPredicted RBP21.6■■□□□ 1.05
PNKP-209ENST00000596726 THAP2Q9H0W7 228 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 PABPC3Q9H361 631 aaKnown RBP21.6■■□□□ 1.05
PNKP-209ENST00000596726 TMEM74BQ9NUR3 256 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 RNASEH1O60930 286 aaKnown RBP21.59■■□□□ 1.05
PNKP-209ENST00000596726 RNF8O76064 485 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 CYP1A2P05177 515 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 GLDCP23378 1020 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 ITPKAP23677 461 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
PNKP-209ENST00000596726 DLG2Q15700 870 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 CST6Q15828 149 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 ASTE1Q2TB18 679 aaPredicted RBP21.59■■□□□ 1.05
PNKP-209ENST00000596726 CCDC122Q5T0U0 273 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 USP30Q70CQ3 517 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 MMAAQ8IVH4 418 aaKnown RBP21.59■■□□□ 1.05
PNKP-209ENST00000596726 RMDN1Q96DB5 314 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 HSPA12BQ96MM6 686 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 PEBP4Q96S96 227 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 GPR174Q9BXC1 333 aa21.59■■□□□ 1.05
PNKP-209ENST00000596726 MFAP3LO75121 409 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 MIPP30301 263 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 ACSL1P33121 698 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 HOXD12P35452 270 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 TBX2Q13207 712 aaPredicted RBP21.58■■□□□ 1.05
PNKP-209ENST00000596726 ELAVL3Q14576 367 aaKnown RBP21.58■■□□□ 1.05
PNKP-209ENST00000596726 ACAP1Q15027 740 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 TTC31Q49AM3 519 aaPredicted RBP21.58■■□□□ 1.05
PNKP-209ENST00000596726 ACCSLQ4AC99 568 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 TCEAL6Q6IPX3 200 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 CYP4V2Q6ZWL3 525 aaPredicted RBP21.58■■□□□ 1.05
PNKP-209ENST00000596726 C12orf50Q8NA57 414 aaPredicted RBP21.58■■□□□ 1.05
PNKP-209ENST00000596726 FOXJ1Q92949 421 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 ARHGEF2Q92974 986 aaKnown RBP21.58■■□□□ 1.05
PNKP-209ENST00000596726 TCEAL3Q969E4 200 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 EPAS1Q99814 870 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 NCAPGQ9BPX3 1015 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 SPON2Q9BUD6 331 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 RBSNQ9H1K0 784 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 ATP13A1Q9HD20 1204 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 RXFP3Q9NSD7 469 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 ABHD10Q9NUJ1 306 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 DLL3Q9NYJ7 618 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 EVLQ9UI08 416 aaPredicted RBP21.58■■□□□ 1.05
PNKP-209ENST00000596726 DNAI1Q9UI46 699 aa21.58■■□□□ 1.05
PNKP-209ENST00000596726 CXorf51AA0A1B0GTR3 108 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 SSU72P8A0A1W2PR75 194 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 METTL12A8MUP2 240 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 WASH4PA8MWX3 477 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 PATE3B3GLJ2 98 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 K7ERQ8 282 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 MID1O15344 667 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 GDF9O60383 454 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 LRCH4O75427 683 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 TPM1P09493 284 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 EPHB2P29323 1055 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 SLC8A1P32418 973 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 HTR7P34969 479 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 ACVRL1P37023 503 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 ETFBP38117 255 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 ID4P47928 161 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 CLCN6P51797 869 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 GALCP54803 685 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 GFPT1Q06210 699 aaPredicted RBP21.57■■□□□ 1.04
PNKP-209ENST00000596726 SLC20A2Q08357 652 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 SLC18A3Q16572 532 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 RSPO4Q2I0M5 234 aaPredicted RBP21.57■■□□□ 1.04
PNKP-209ENST00000596726 ERMARDQ5T6L9 678 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 LINGO4Q6UY18 593 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 FAM124AQ86V42 546 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 RTL3Q8N8U3 475 aaKnown RBP21.57■■□□□ 1.04
PNKP-209ENST00000596726 ATP11CQ8NB49 1132 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 DNASE2BQ8WZ79 361 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 ARHGEF26Q96DR7 871 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 SNRNP25Q9BV90 132 aaKnown RBP21.57■■□□□ 1.04
PNKP-209ENST00000596726 PCED1AQ9H1Q7 454 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 MAGEH1Q9H213 219 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 GPATCH2LQ9NWQ4 482 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 PCSK1NQ9UHG2 260 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 AP4E1Q9UPM8 1137 aa21.57■■□□□ 1.04
PNKP-209ENST00000596726 ATXN2Q99700 1313 aaKnown RBP21.56■■□□□ 1.04
PNKP-209ENST00000596726 EIF3CLB5ME19 914 aaKnown RBP21.56■■□□□ 1.04
PNKP-209ENST00000596726 CBX4O00257 560 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 KHNYNO15037 678 aaKnown RBP21.56■■□□□ 1.04
PNKP-209ENST00000596726 MCF2LO15068 1137 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 ALOX15BO15296 676 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 SMAD6O43541 496 aaKnown RBP21.56■■□□□ 1.04
PNKP-209ENST00000596726 CREB3O43889 395 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 ADH1BP00325 375 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 PCK1P35558 622 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 ADKP55263 362 aaKnown RBP21.56■■□□□ 1.04
PNKP-209ENST00000596726 ARF5P84085 180 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 CA9Q16790 459 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 AASDHQ4L235 1098 aaPredicted RBP21.56■■□□□ 1.04
PNKP-209ENST00000596726 SYCP2LQ5T4T6 812 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 RETSATQ6NUM9 610 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 Q6ZVU0 165 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 PSTKQ8IV42 348 aaKnown RBP21.56■■□□□ 1.04
PNKP-209ENST00000596726 NETO1Q8TDF5 533 aa21.56■■□□□ 1.04
PNKP-209ENST00000596726 OR8D1Q8WZ84 308 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms