RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TRIM69Q86WT6 500 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 WDTC1Q8N5D0 677 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 C1orf131Q8NDD1 294 aaKnown RBP23.28■■□□□ 1.32
SSBP4-203ENST00000593641 PIP4K2CQ8TBX8 421 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 SHC3Q92529 594 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 ALG14Q96F25 216 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 MUC3BQ9H195 1237 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 ARHGAP20Q9P2F6 1191 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 RWDD2AQ9UIY3 292 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 SARDHQ9UL12 918 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 MCF2LO15068 1137 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 BNIP3LO60238 219 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 DAB1O75553 588 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 GGCXP38435 758 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 CNTN1Q12860 1018 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 POM121L1PQ3SYA9 428 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 SETMARQ53H47 684 aaPredicted RBP23.27■■□□□ 1.32
SSBP4-203ENST00000593641 AGBL4Q5VU57 503 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 OLFML1Q6UWY5 402 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 SH2D3CQ8N5H7 860 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 PPM1HQ9ULR3 514 aa23.27■■□□□ 1.32
SSBP4-203ENST00000593641 FARP1Q9Y4F1 1045 aaPredicted RBP23.27■■□□□ 1.32
SSBP4-203ENST00000593641 A0A087WV48 116 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 GTPBP10A4D1E9 387 aaKnown RBP23.26■■□□□ 1.31
SSBP4-203ENST00000593641 M0QYT0 321 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 GADD45BO75293 160 aaPredicted RBP23.26■■□□□ 1.31
SSBP4-203ENST00000593641 PAGE1O75459 146 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 NOS2P35228 1153 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 KRT9P35527 623 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 IRAK1P51617 712 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 CDH4P55283 916 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 APBA1Q02410 837 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 BNIP3Q12983 259 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 SOWAHCQ53LP3 525 aaPredicted RBP23.26■■□□□ 1.31
SSBP4-203ENST00000593641 SFMBT2Q5VUG0 894 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 SLC26A9Q7LBE3 791 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 OR52K2Q8NGK3 314 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 CCDC114Q96M63 670 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 PREBQ9HCU5 417 aa23.26■■□□□ 1.31
SSBP4-203ENST00000593641 PRAMEF26H0Y7S4 382 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 ERBB2P04626 1255 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 KRT83P78385 493 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 SLC6A3Q01959 620 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 ILKQ13418 452 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 HES3Q5TGS1 186 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 SMYD5Q6GMV2 418 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 SPATS2Q86XZ4 545 aaKnown RBP23.25■■□□□ 1.31
SSBP4-203ENST00000593641 DCBLD2Q96PD2 775 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 C2orf49Q9BVC5 232 aaPredicted RBP23.25■■□□□ 1.31
SSBP4-203ENST00000593641 SIK2Q9H0K1 926 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 RRN3Q9NYV6 651 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 TBC1D30Q9Y2I9 924 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 OR51B4Q9Y5P0 310 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 TRPM6Q9BX84 2022 aa23.25■■□□□ 1.31
SSBP4-203ENST00000593641 DOCK4Q8N1I0 1966 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 RHOCP08134 193 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 PON1P27169 355 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 MTIF2P46199 727 aaKnown RBP23.24■■□□□ 1.31
SSBP4-203ENST00000593641 CLDN6P56747 220 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 CCDC15Q0P6D6 951 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 PTPN20Q4JDL3 420 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 ZDHHC17Q8IUH5 632 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 ATP11CQ8NB49 1132 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 ZNF397Q8NF99 534 aaPredicted RBP23.24■■□□□ 1.31
SSBP4-203ENST00000593641 TSC1Q92574 1164 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 STAP1Q9ULZ2 295 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 HS3ST2Q9Y278 367 aa23.24■■□□□ 1.31
SSBP4-203ENST00000593641 CKMT2P17540 419 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 ABCG1P45844 678 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 TARDBPQ13148 414 aaKnown RBP eCLIP23.23■■□□□ 1.31
SSBP4-203ENST00000593641 C5orf22Q49AR2 442 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 BRMS1LQ5PSV4 323 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 C14orf80Q86SX3 495 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 KLHDC7BQ96G42 594 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 TKTL2Q9H0I9 626 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 PDCL3Q9H2J4 239 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 WDCPQ9H6R7 721 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 DYRK4Q9NR20 520 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 PIGVQ9NUD9 493 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 KIAA1468Q9P260 1216 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 PAXBP1Q9Y5B6 917 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 AK5Q9Y6K8 562 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 SHROOM3Q8TF72 1996 aa23.23■■□□□ 1.31
SSBP4-203ENST00000593641 EIF4E1BA6NMX2 242 aaKnown RBP23.22■■□□□ 1.31
SSBP4-203ENST00000593641 KPNA3O00505 521 aaPredicted RBP23.22■■□□□ 1.31
SSBP4-203ENST00000593641 RNGTTO60942 597 aaKnown RBP23.22■■□□□ 1.31
SSBP4-203ENST00000593641 SRCP12931 536 aa23.22■■□□□ 1.31
SSBP4-203ENST00000593641 TPD52L1Q16890 204 aaPredicted RBP23.22■■□□□ 1.31
SSBP4-203ENST00000593641 HS1BP3Q53T59 392 aa23.22■■□□□ 1.31
SSBP4-203ENST00000593641 FBXL19Q6PCT2 694 aa23.22■■□□□ 1.31
SSBP4-203ENST00000593641 KANSL1Q7Z3B3 1105 aa23.22■■□□□ 1.31
SSBP4-203ENST00000593641 SLC47A2Q86VL8 602 aa23.22■■□□□ 1.31
SSBP4-203ENST00000593641 ARHGEF38Q9NXL2 777 aa23.22■■□□□ 1.31
SSBP4-203ENST00000593641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.22■■□□□ 1.31
SSBP4-203ENST00000593641 DNAJC12Q9UKB3 198 aa23.22■■□□□ 1.31
SSBP4-203ENST00000593641 PTPRQQ9UMZ3 2332 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 SDC3O75056 442 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 CNTN5O94779 1100 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 CHRNA3P32297 505 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 SULT1E1P49888 294 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms