RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 ZNF670Q9BS34 389 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 C2orf49Q9BVC5 232 aaPredicted RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 MTG2Q9H4K7 406 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 LRRC19Q9H756 370 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 CD248Q9HCU0 757 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 ATP13A1Q9HD20 1204 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 DDX56Q9NY93 547 aaKnown RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 SLCO3A1Q9UIG8 710 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 SLC8A2Q9UPR5 921 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 TTC34A8MYJ7 566 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 ZNF487B1APH4 448 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 RASA4BC9J798 803 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 CBX4O00257 560 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 RASA4O43374 803 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 KDELR3O43731 214 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 KRT86O43790 486 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 MT-CO1P00395 513 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 CTNNA2P26232 953 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 CTNNA1P35221 906 aaKnown RBP10.17□□□□□ -0.78
TPM4-216ENST00000592822 ETFBP38117 255 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
TPM4-216ENST00000592822 DGKEP52429 567 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 ST8SIA6P61647 398 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 ARF5P84085 180 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 CSTF1Q05048 431 aaKnown RBP10.17□□□□□ -0.78
TPM4-216ENST00000592822 DMWDQ09019 674 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 ANGPT1Q15389 498 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 TAZQ16635 292 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 PARP15Q460N3 678 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 ZFYVE27Q5T4F4 411 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 IL31Q6EBC2 164 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 TMCO3Q6UWJ1 677 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 LINGO4Q6UY18 593 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 NT5DC3Q86UY8 548 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 MAP7D3Q8IWC1 876 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 TP53INP2Q8IXH6 220 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 KATNAL2Q8IYT4 538 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 PQLC3Q8N755 202 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 ZNF366Q8N895 744 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 KDM1BQ8NB78 822 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 PRSS33Q8NF86 280 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 RNF25Q96BH1 459 aaPredicted RBP10.17□□□□□ -0.78
TPM4-216ENST00000592822 CELF6Q96J87 481 aaKnown RBP10.17□□□□□ -0.78
TPM4-216ENST00000592822 HHIPQ96QV1 700 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 SLC39A8Q9C0K1 460 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 LZTFL1Q9NQ48 299 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 DONSONQ9NYP3 566 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 SLC25A13Q9UJS0 675 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 FBXO4Q9UKT5 387 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 GUCA1BQ9UMX6 200 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 HS3ST2Q9Y278 367 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 PCDHA3Q9Y5H8 950 aa10.17□□□□□ -0.78
TPM4-216ENST00000592822 EML5Q05BV3 1969 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 K7ERQ8 282 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 SMAD6O43541 496 aaKnown RBP10.16□□□□□ -0.78
TPM4-216ENST00000592822 ATP9BO43861 1147 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 APBB3O95704 486 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 FTCDO95954 541 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 CD160O95971 181 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 EPHX1P07099 455 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 SP9P0CG40 484 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 SRCP12931 536 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 VAV1P15498 845 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 HOXA6P31267 233 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 CDKN2BP42772 138 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 PXNP49023 591 aaPredicted RBP10.16□□□□□ -0.78
TPM4-216ENST00000592822 PEX5P50542 639 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 PAPOLAP51003 745 aaKnown RBP10.16□□□□□ -0.78
TPM4-216ENST00000592822 SERINC3Q13530 473 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 CAMK2GQ13555 558 aaPredicted RBP10.16□□□□□ -0.78
TPM4-216ENST00000592822 PAFAH1B3Q15102 231 aaKnown RBP10.16□□□□□ -0.78
TPM4-216ENST00000592822 HNRNPA1L2Q32P51 320 aaKnown RBP10.16□□□□□ -0.78
TPM4-216ENST00000592822 NCBP2-AS2Q69YL0 99 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 RETSATQ6NUM9 610 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 MFSD7Q6UXD7 560 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 LEKR1Q6ZMV7 388 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 SPOCD1Q6ZMY3 1216 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 PEX26Q7Z412 305 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 VSIG1Q86XK7 387 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 REXO1L1PQ8IX06 675 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 SYCE1Q8N0S2 351 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 SH2D3CQ8N5H7 860 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 CAMKK1Q8N5S9 505 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 LZTR1Q8N653 840 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 ATP11CQ8NB49 1132 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 TSTD1Q8NFU3 115 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 FRS2Q8WU20 508 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 NELL1Q92832 810 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 RNF157Q96PX1 679 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 PRSS16Q9NQE7 514 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 HPCAL4Q9UM19 191 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 ACTL7AQ9Y615 435 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
TPM4-216ENST00000592822 CACNA1HO95180 2353 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 CXorf51AA0A1B0GTR3 108 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 TCRBV21S2A2A0A5A6 115 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 CCDC66A2RUB6 948 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 ARHGAP42A6NI28 874 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 H0Y858 1186 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 J3KR12 359 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms