RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 CCDC34Q96HJ3 373 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 APOLD1Q96LR9 279 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 NT5C1BQ96P26 610 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 MYOCQ99972 504 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 FEM1AQ9BSK4 669 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 CALN1Q9BXU9 219 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 SEMA4CQ9C0C4 833 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 CLMPQ9H6B4 373 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 USP29Q9HBJ7 922 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 POPDC2Q9HBU9 364 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 THSD1Q9NS62 852 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 EVA1BQ9NVM1 165 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 SLC25A13Q9UJS0 675 aa9.42□□□□□ -0.9
APOC1-207ENST00000592176 FARP1Q9Y4F1 1045 aaPredicted RBP9.42□□□□□ -0.9
APOC1-207ENST00000592176 MUC22E2RYF6 1773 aaPredicted RBP9.42□□□□□ -0.9
APOC1-207ENST00000592176 PLXNA2O75051 1894 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.41□□□□□ -0.9
APOC1-207ENST00000592176 TCAF2A6NFQ2 919 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 SCAMP1O15126 338 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 ALOX15BO15296 676 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 GP1BAP07359 652 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 GIMD1P0DJR0 217 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 SLC2A3P11169 496 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 C6P13671 934 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 PRLRP16471 622 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 FMO5P49326 533 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 CLDN2P57739 230 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 TAS2R38P59533 333 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 CETN1Q12798 172 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 ZNF177Q13360 481 aaPredicted RBP9.41□□□□□ -0.9
APOC1-207ENST00000592176 ZNF284Q2VY69 593 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 ZNF542PQ5EBM4 170 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 TTC39BQ5VTQ0 682 aaPredicted RBP9.41□□□□□ -0.9
APOC1-207ENST00000592176 Q6ZVU0 165 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 RRAGAQ7L523 313 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 DCP2Q8IU60 420 aaKnown RBP9.41□□□□□ -0.9
APOC1-207ENST00000592176 FAM181AQ8N9Y4 354 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 TMEM145Q8NBT3 493 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 OR13H1Q8NG92 308 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 MAPK15Q8TD08 544 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 STK32AQ8WU08 396 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 KAT5Q92993 513 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 SLC35C1Q96A29 364 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 ALG14Q96F25 216 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 IFT43Q96FT9 208 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 MED15Q96RN5 788 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 PRMT1Q99873 361 aaKnown RBP9.41□□□□□ -0.9
APOC1-207ENST00000592176 DUSP23Q9BVJ7 150 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 SLC4A5Q9BY07 1137 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 METTL14Q9HCE5 456 aaKnown RBP9.41□□□□□ -0.9
APOC1-207ENST00000592176 RMND1Q9NWS8 449 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 NLGN3Q9NZ94 848 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 HS3ST3A1Q9Y663 406 aa9.41□□□□□ -0.9
APOC1-207ENST00000592176 SYNJ2BP-COX16A0A087WUM0 186 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 CPED1A4D0V7 1026 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 CYSRT1A8MQ03 144 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 K7ESM1 405 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 KPNA3O00505 521 aaPredicted RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 PMM2O15305 246 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 PCDH8O95206 1070 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 HNRNPA2B1P22626 353 aaKnown RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 CCR1P32246 355 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 CHRNA3P32297 505 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 HNRNPKP61978 463 aaKnown RBP eCLIP9.4□□□□□ -0.9
APOC1-207ENST00000592176 KRT85P78386 507 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 CDK17Q00537 523 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 EIF4EBP2Q13542 120 aaPredicted RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 ISXQ2M1V0 245 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 PIP5KL1Q5T9C9 394 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 ZNF658Q5TYW1 1059 aaPredicted RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 CXorf57Q6NSI4 855 aaKnown RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 FBXL22Q6P050 247 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 DENND1BQ6P3S1 775 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 Q6ZSR6 202 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 TMEM110Q86TL2 294 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 HORMAD1Q86X24 394 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 HSCBQ8IWL3 235 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 SH2D3CQ8N5H7 860 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 ATP11CQ8NB49 1132 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 EHBP1Q8NDI1 1231 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 TMIEQ8NEW7 156 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 FAM174AQ8TBP5 190 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 IFI44Q8TCB0 444 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 SNRNP27Q8WVK2 155 aaKnown RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 TTC9Q92623 222 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 GRAMD1AQ96CP6 724 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 CCDC97Q96F63 343 aaPredicted RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 MED8Q96G25 268 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 CCDC114Q96M63 670 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 SLC46A1Q96NT5 459 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 RPRD1AQ96P16 312 aaPredicted RBP9.4□□□□□ -0.9
APOC1-207ENST00000592176 NOX5Q96PH1 765 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 THAP9Q9H5L6 903 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 FZD3Q9NPG1 666 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 ASCL3Q9NQ33 180 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 DYRK4Q9NR20 520 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 DNAJC28Q9NX36 388 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 COX16Q9P0S2 106 aa9.4□□□□□ -0.9
APOC1-207ENST00000592176 IPO11Q9UI26 975 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms