RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MCEEQ96PE7 176 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 HAPLN3Q96S86 360 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 PPP1R9BQ96SB3 815 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.67□□□□□ -0.7
SDF2-208ENST00000589788 RALGAPA1Q6GYQ0 2036 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 DDX3XO00571 662 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDF2-208ENST00000589788 DCLK1O15075 740 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 SRGAP2O75044 1071 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 RTN2O75298 545 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 RHOBTB1O94844 696 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 AVPP01185 164 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 FTLP02792 175 aaPredicted RBP10.66□□□□□ -0.7
SDF2-208ENST00000589788 GYPCP04921 128 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 RETP07949 1114 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 HLA-EP13747 358 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 CASP14P31944 242 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 CDH4P55283 916 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 CCDC173Q0VFZ6 552 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 TRIM14Q14142 442 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 PLEKHG6Q3KR16 790 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 PLK5Q496M5 336 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 SPECC1LQ69YQ0 1117 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 KIAA1324Q6UXG2 1013 aaKnown RBP10.66□□□□□ -0.7
SDF2-208ENST00000589788 BNIPLQ7Z465 357 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 C14orf80Q86SX3 495 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 DCLK2Q8N568 766 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 OLIG1Q8TAK6 271 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 TTC17Q96AE7 1141 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 TRIM11Q96F44 468 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 LOXL4Q96JB6 756 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 ZC3H10Q96K80 434 aaKnown RBP10.66□□□□□ -0.7
SDF2-208ENST00000589788 LMLNQ96KR4 655 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 MRGPRX1Q96LB2 322 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 PRDM16Q9HAZ2 1276 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 ANLNQ9NQW6 1124 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 PARVAQ9NVD7 372 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 SNX10Q9Y5X0 201 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 EP300Q09472 2414 aaPredicted RBP10.66□□□□□ -0.7
SDF2-208ENST00000589788 THADAQ6YHU6 1953 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 OTOGLQ3ZCN5 2332 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 CKAP5Q14008 2032 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 GPR179Q6PRD1 2367 aa10.66□□□□□ -0.7
SDF2-208ENST00000589788 SDK1Q7Z5N4 2213 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 TCRBV5S1A1TA0A578 114 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 E9PAM4 449 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 I6L893 689 aaPredicted RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 ZNF217O75362 1048 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 MYBL1P10243 752 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 BCKDHBP21953 392 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 MZF1P28698 734 aaPredicted RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 ADRA1BP35368 520 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 NNMTP40261 264 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 P2RY2P41231 377 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 IRAK1P51617 712 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 HDAC4P56524 1084 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 RPL7AP62424 266 aaKnown RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 ECT2LQ008S8 904 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 SULT2A1Q06520 285 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 SPEM2Q0P670 501 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 MAMLD1Q13495 774 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 C5orf22Q49AR2 442 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 C4orf17Q53FE4 359 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 RAB6CQ53S08 254 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 SCYL2Q6P3W7 929 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 LPCAT2Q7L5N7 544 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 TMC6Q7Z403 805 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 TMPRSS6Q8IU80 811 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 DRC7Q8IY82 874 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 KIAA2013Q8IYS2 634 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 ALDH16A1Q8IZ83 802 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 APCDD1Q8J025 514 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 GPR161Q8N6U8 529 aaKnown RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 ZNF366Q8N895 744 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 CENPIQ92674 756 aaPredicted RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 PRCCQ92733 491 aaPredicted RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 ZNF653Q96CK0 615 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 CNPY3Q9BT09 278 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 RAB6CQ9H0N0 254 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 MUC3BQ9H195 1237 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 DUSP15Q9H1R2 295 aaPredicted RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 SLC6A17Q9H1V8 727 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 TMEM245Q9H330 911 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 CD248Q9HCU0 757 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 IMPACTQ9P2X3 320 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 OR12D3Q9UGF7 316 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 SUN2Q9UH99 717 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 ADAMTS1Q9UHI8 967 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 VPS28Q9UK41 221 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 INTS6Q9UL03 887 aaKnown RBP10.65□□□□□ -0.7
SDF2-208ENST00000589788 USP18Q9UMW8 372 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 ZNF232Q9UNY5 417 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 ERVW-1Q9UQF0 538 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 PLXND1Q9Y4D7 1925 aa10.65□□□□□ -0.7
SDF2-208ENST00000589788 MUC22E2RYF6 1773 aaPredicted RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 IGLV3-10A0A075B6K4 115 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 DRGXA6NNA5 263 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 GOLGA6L6A8MZA4 724 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 CCP110O43303 1012 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms