RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 IL31Q6EBC2 164 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 RETSATQ6NUM9 610 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 LINGO4Q6UY18 593 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 Q6ZVU0 165 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 DSG4Q86SJ6 1040 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 SLC41A1Q8IVJ1 513 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 RGL4Q8IZJ4 473 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 SH2D3CQ8N5H7 860 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 OR8K1Q8NGG5 319 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 NETO1Q8TDF5 533 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 FNIP1Q8TF40 1166 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 OR8D1Q8WZ84 308 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 RMDN1Q96DB5 314 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 CCDC114Q96M63 670 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 DNAJC7Q99615 494 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 TRIM5Q9C035 493 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 THAP2Q9H0W7 228 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 DEF6Q9H4E7 631 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 TMEM248Q9NWD8 314 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 GPATCH2LQ9NWQ4 482 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 PCSK1NQ9UHG2 260 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 DNAI1Q9UI46 699 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 SCML1Q9UN30 329 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 AP4E1Q9UPM8 1137 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 NEU3Q9UQ49 428 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 HS3ST2Q9Y278 367 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 NCKAP1Q9Y2A7 1128 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 DOCK4Q8N1I0 1966 aa15.18■□□□□ 0.02
ATG4D-207ENST00000587256 TNRC6BQ9UPQ9 1833 aaKnown RBP15.17■□□□□ 0.02
ATG4D-207ENST00000587256 NUP205Q92621 2012 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 PATE3B3GLJ2 98 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 MID1O15344 667 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 ATP9BO43861 1147 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 RAMP2O60895 175 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 MFAP3LO75121 409 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 RNASEH2AO75792 299 aaKnown RBP15.17■□□□□ 0.02
ATG4D-207ENST00000587256 ADH1BP00325 375 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 IL1BP01584 269 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 CFIP05156 583 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 SRCP12931 536 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 GLDCP23378 1020 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 HOXD12P35452 270 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 EIF4A3P38919 411 aaKnown RBP15.17■□□□□ 0.02
ATG4D-207ENST00000587256 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
ATG4D-207ENST00000587256 CLCN6P51797 869 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 TPI1P60174 286 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 DLG2Q15700 870 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 TRIM61Q5EBN2 209 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 ALKBH5Q6P6C2 394 aaKnown RBP15.17■□□□□ 0.02
ATG4D-207ENST00000587256 SARM1Q6SZW1 724 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 RABEPKQ7Z6M1 372 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 NLRP14Q86W24 1093 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 ZNF354CQ86Y25 554 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 FRS2Q8WU20 508 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 SNX19Q92543 992 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 OMDQ99983 421 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 EDEM2Q9BV94 578 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 BTBD1Q9H0C5 482 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 RETREG1Q9H6L5 497 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 ABHD10Q9NUJ1 306 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 NDFIP2Q9NV92 336 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 PILRBQ9UKJ0 227 aa15.17■□□□□ 0.02
ATG4D-207ENST00000587256 A0A1W2PP55 124 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 FGF10O15520 208 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 GDF9O60383 454 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 SEMA4FO95754 770 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 MT-CO1P00395 513 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 SDHBP21912 280 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 SLC8A1P32418 973 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 ACSL1P33121 698 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 GFPT1Q06210 699 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 DCAF12L1Q5VU92 463 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 PEAR1Q5VY43 1037 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 C22orf39Q6P5X5 142 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 USP30Q70CQ3 517 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 CNGA4Q8IV77 575 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 RTL3Q8N8U3 475 aaKnown RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 CADM4Q8NFZ8 388 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 ZNF419Q96HQ0 510 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 PEBP4Q96S96 227 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 NCAPGQ9BPX3 1015 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 SNRNP25Q9BV90 132 aaKnown RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 NUP85Q9BW27 656 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 NUSAP1Q9BXS6 441 aaKnown RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 DHX35Q9H5Z1 703 aaKnown RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 CATSPERBQ9H7T0 1116 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 SGK2Q9HBY8 427 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 TMEM74BQ9NUR3 256 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 FBXL12Q9NXK8 326 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 SUSD2Q9UGT4 822 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 EVLQ9UI08 416 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-207ENST00000587256 ANAPC7Q9UJX3 599 aa15.16■□□□□ 0.02
ATG4D-207ENST00000587256 DMXL1Q9Y485 3027 aa15.15■□□□□ 0.02
ATG4D-207ENST00000587256 LNP1A1A4G5 178 aa15.15■□□□□ 0.02
ATG4D-207ENST00000587256 EIF3CLB5ME19 914 aaKnown RBP15.15■□□□□ 0.02
ATG4D-207ENST00000587256 C1QTNF3-AMACRE9PGA6 284 aa15.15■□□□□ 0.02
ATG4D-207ENST00000587256 K7ERQ8 282 aa15.15■□□□□ 0.02
ATG4D-207ENST00000587256 ALOX15BO15296 676 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms