RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 SYNCQ9H7C4 482 aa14.39□□□□□ -0.11
ATG4D-206ENST00000586863 PIGVQ9NUD9 493 aa14.39□□□□□ -0.11
ATG4D-206ENST00000586863 DKK4Q9UBT3 224 aa14.39□□□□□ -0.11
ATG4D-206ENST00000586863 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
ATG4D-206ENST00000586863 PPM1HQ9ULR3 514 aa14.39□□□□□ -0.11
ATG4D-206ENST00000586863 SNX10Q9Y5X0 201 aa14.39□□□□□ -0.11
ATG4D-206ENST00000586863 FAM170AA1A519 330 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 ENC1O14682 589 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 SLC7A4O43246 635 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 CLDN11O75508 207 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 ADCY5O95622 1261 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 KRT9P35527 623 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 UBE2HP62256 183 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 CYP4F3Q08477 520 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 DLG2Q15700 870 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 MAN2A1Q16706 1144 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 COL28A1Q2UY09 1125 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 ALFQ53S48 1182 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 DPY19L2P1Q6NXN4 242 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 DSG4Q86SJ6 1040 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 SPATS2Q86XZ4 545 aaKnown RBP14.38□□□□□ -0.11
ATG4D-206ENST00000586863 ZNF683Q8IZ20 524 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 SH2D3CQ8N5H7 860 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 ZNF397Q8NF99 534 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-206ENST00000586863 PIP4K2CQ8TBX8 421 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 CNDP2Q96KP4 475 aaKnown RBP14.38□□□□□ -0.11
ATG4D-206ENST00000586863 PSMB7Q99436 277 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 NPY6RQ99463 290 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 SIK2Q9H0K1 926 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 TPX2Q9ULW0 747 aaKnown RBP14.38□□□□□ -0.11
ATG4D-206ENST00000586863 TBC1D30Q9Y2I9 924 aa14.38□□□□□ -0.11
ATG4D-206ENST00000586863 C1QTNF3-AMACRE9PGA6 284 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 MCF2LO15068 1137 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 YKT6O15498 198 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 BNIP3LO60238 219 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 SNAP91O60641 907 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 LDOC1O95751 146 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-206ENST00000586863 MT-CO1P00395 513 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 CTSLP07711 333 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 SRCP12931 536 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 ARRB1P49407 418 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-206ENST00000586863 CXCR3P49682 368 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 ACADVLP49748 655 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 SULT1E1P49888 294 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 CDH4P55283 916 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 TAS2R38P59533 333 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 RNASE9P60153 205 aaKnown RBP14.37□□□□□ -0.11
ATG4D-206ENST00000586863 BNIP3Q12983 259 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 MTA1Q13330 715 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 COL9A2Q14055 689 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-206ENST00000586863 SLC45A4Q5BKX6 768 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 FAM46CQ5VWP2 391 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 PRPF39Q86UA1 669 aaKnown RBP14.37□□□□□ -0.11
ATG4D-206ENST00000586863 TRIM69Q86WT6 500 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 FAM71AQ8IYT1 594 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 EID2Q8N6I1 236 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 MFSD2AQ8NA29 543 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 PPP1R9BQ96SB3 815 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 TKTL2Q9H0I9 626 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 MUC3BQ9H195 1237 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 KDM4CQ9H3R0 1056 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 TMPRSS4Q9NRS4 437 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 ARHGEF38Q9NXL2 777 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 HS3ST2Q9Y278 367 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 CA5BQ9Y2D0 317 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 PCDHGA1Q9Y5H4 931 aa14.37□□□□□ -0.11
ATG4D-206ENST00000586863 CHD5Q8TDI0 1954 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 K7ERQ8 282 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 ALOX15BO15296 676 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 RHOCP08134 193 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 RXRGP48443 463 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 TPD52L1Q16890 204 aaPredicted RBP14.36□□□□□ -0.11
ATG4D-206ENST00000586863 HSP90AA4PQ58FG1 418 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 MIIPQ5JXC2 388 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 PIP5KL1Q5T9C9 394 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 SFMBT2Q5VUG0 894 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 SMYD5Q6GMV2 418 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 KANSL1Q7Z3B3 1105 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 PDZD3Q86UT5 571 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 MLKLQ8NB16 471 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 HNRNPLLQ8WVV9 542 aaKnown RBP14.36□□□□□ -0.11
ATG4D-206ENST00000586863 NT5C3BQ969T7 300 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 TBCBQ99426 244 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 WDCPQ9H6R7 721 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 ERVMER34-1Q9H9K5 563 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.36□□□□□ -0.11
ATG4D-206ENST00000586863 VPS51Q9UID3 782 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 STAP1Q9ULZ2 295 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 FHOD1Q9Y613 1164 aa14.36□□□□□ -0.11
ATG4D-206ENST00000586863 GCN1Q92616 2671 aaKnown RBP14.35□□□□□ -0.11
ATG4D-206ENST00000586863 A0A0D9SEW6 157 aa14.35□□□□□ -0.11
ATG4D-206ENST00000586863 RNF103O00237 685 aa14.35□□□□□ -0.11
ATG4D-206ENST00000586863 SMAD6O43541 496 aaKnown RBP14.35□□□□□ -0.11
ATG4D-206ENST00000586863 RFPL3O75679 317 aa14.35□□□□□ -0.11
ATG4D-206ENST00000586863 PRKCSHP14314 528 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-206ENST00000586863 CYP11B1P15538 503 aa14.35□□□□□ -0.11
ATG4D-206ENST00000586863 ZNF18P17022 549 aa14.35□□□□□ -0.11
ATG4D-206ENST00000586863 RRM1P23921 792 aa14.35□□□□□ -0.11
ATG4D-206ENST00000586863 CDH5P33151 784 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms