RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 GANCQ8TET4 914 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 CTNNBL1Q8WYA6 563 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 PIGKQ92643 395 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 PTPRN2Q92932 1015 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 PEBP4Q96S96 227 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 CHP1Q99653 195 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 NCAPGQ9BPX3 1015 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 RSPH9Q9H1X1 276 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 SMOC1Q9H4F8 434 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 DHX35Q9H5Z1 703 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 RETREG1Q9H6L5 497 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 NDFIP2Q9NV92 336 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 TMEM248Q9NWD8 314 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 NEU3Q9UQ49 428 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 ATXN2Q99700 1313 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 BCLAF3A2AJT9 711 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 ATP9BO43861 1147 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 RAMP2O60895 175 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 LRCH4O75427 683 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 MT-CO1P00395 513 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 SRCP12931 536 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 TGM1P22735 817 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 ACVRL1P37023 503 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 ETFBP38117 255 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 PSMD8P48556 350 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 ZNF75DP51815 510 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 TPI1P60174 286 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 ZBTB16Q05516 673 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 PIGHQ14442 188 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 ELAVL3Q14576 367 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 DLG2Q15700 870 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 CST6Q15828 149 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 CSRP2Q16527 193 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 SPDYCQ5MJ68 293 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 ERMARDQ5T6L9 678 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 DAB2IPQ5VWQ8 1189 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 Q6ZVU0 165 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 FRS2Q8WU20 508 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 HSPA12BQ96MM6 686 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 GPR174Q9BXC1 333 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 CATSPERBQ9H7T0 1116 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 WSB2Q9NYS7 404 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 CTTNBP2NLQ9P2B4 639 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 IP6K2Q9UHH9 426 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 NENFQ9UMX5 172 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 HS3ST2Q9Y278 367 aa12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-218ENST00000582955 MEI4A8MW99 385 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 K7ERQ8 282 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 EEF2KO00418 725 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 MID1O15344 667 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 DAPK3O43293 454 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 IL1BP01584 269 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 ITPKAP23677 461 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 PCK1P35558 622 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 SSR1P43307 286 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 LMNB2Q03252 620 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 ZNF33AQ06730 810 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 SEMA3BQ13214 749 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 ACAP1Q15027 740 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 POLD3Q15054 466 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 SF3A2Q15428 464 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 CA9Q16790 459 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 ASTE1Q2TB18 679 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 PPP6R3Q5H9R7 873 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 RETSATQ6NUM9 610 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 DSG4Q86SJ6 1040 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 SLC41A1Q8IVJ1 513 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 RGL4Q8IZJ4 473 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 RTL3Q8N8U3 475 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 OR8D1Q8WZ84 308 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 ARHGEF2Q92974 986 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 CCDC114Q96M63 670 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 KCTD15Q96SI1 283 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 FAM129BQ96TA1 746 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 OMDQ99983 421 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 PACSIN1Q9BY11 444 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 MAGEH1Q9H213 219 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 PABPC3Q9H361 631 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 ZWILCHQ9H900 591 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 HPCAL4Q9UM19 191 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 SCML1Q9UN30 329 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 RALGAPA1Q6GYQ0 2036 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 CFAP54Q96N23 3096 aa12.89□□□□□ -0.35
SMARCE1-218ENST00000582955 WDR87Q6ZQQ6 2873 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 A0A1W2PP55 124 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 EIF3CLB5ME19 914 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms