RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114		I6L893	689 aa	Predicted RBP	11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114		K7ERQ8	282 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	LAT	O43561	262 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PLRG1	O43660	514 aa	Known RBP	11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ATP9B	O43861	1147 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SDC3	O75056	442 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ENDOD1	O94919	500 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	RHOC	P08134	193 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	RRM1	P23921	792 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	EPHA8	P29322	1005 aa	Predicted RBP	11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	NOS2	P35228	1153 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ARRB1	P49407	418 aa	Predicted RBP	11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SULT1E1	P49888	294 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	OXCT1	P55809	520 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CAMK2B	Q13554	666 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	RAPGEF1	Q13905	1077 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	C2CD6	Q53TS8	623 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SLC45A4	Q5BKX6	768 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	AGBL4	Q5VU57	503 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TAF3	Q5VWG9	929 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FAM46C	Q5VWP2	391 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	NAPEPLD	Q6IQ20	393 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	LINGO4	Q6UY18	593 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SLC26A9	Q7LBE3	791 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TFAP2D	Q7Z6R9	452 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	DSG4	Q86SJ6	1040 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PDZD3	Q86UT5	571 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SH2D3C	Q8N5H7	860 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ATP11C	Q8NB49	1132 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	LRIG1	Q96JA1	1093 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	DCBLD2	Q96PD2	775 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PSMB7	Q99436	277 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PDCL3	Q9H2J4	239 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	WDCP	Q9H6R7	721 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CAAP1	Q9H8G2	361 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FZD3	Q9NPG1	666 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PPM1H	Q9ULR3	514 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	APC2	O95996	2303 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	GTPBP10	A4D1E9	387 aa	Known RBP	11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	RNF103	O00237	685 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	KPNA3	O00505	521 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PES1	O00541	588 aa	Known RBP	11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SLC31A1	O15431	190 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	RNGTT	O60942	597 aa	Known RBP	11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CLDN11	O75508	207 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	RFPL3	O75679	317 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CTSL	P07711	333 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SRC	P12931	536 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PRKCSH	P14314	528 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	JUP	P14923	745 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PRLR	P16471	622 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	GLDC	P23378	1020 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CDH4	P55283	916 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TAS2R38	P59533	333 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	UBE2H	P62256	183 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	DEUP1	Q05D60	604 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	STAT4	Q14765	748 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	MAN2A1	Q16706	1144 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	MFSD2A	Q8NA29	543 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CRELD1	Q96HD1	420 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TBCB	Q99426	244 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	NPY6R	Q99463	290 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TNKS2	Q9H2K2	1166 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.93	□□□□□ -0.5	4e-8	■□□□□ 8
CDK5RAP3-223	ENST00000582114	MPP6	Q9NZW5	540 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	VPS51	Q9UID3	782 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FHOD1	Q9Y613	1164 aa		11.93	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ITPR1	Q14643	2758 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ACACA	Q13085	2346 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114		A0A0D9SEW6	157 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	GOLGA8S	H3BPF8	625 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	MCF2L	O15068	1137 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SLC7A4	O43246	635 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SMAD6	O43541	496 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ACADVL	P49748	655 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SNX16	P57768	344 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	KRT83	P78385	493 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	DRAP1	Q14919	205 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	MIIP	Q5JXC2	388 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PIP5KL1	Q5T9C9	394 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	HES3	Q5TGS1	186 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TMPRSS12	Q86WS5	348 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TRIM69	Q86WT6	500 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PDCD7	Q8N8D1	485 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CHST14	Q8NCH0	376 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TMEM35B	Q8NCS4	154 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ZNF397	Q8NF99	534 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	OR7D4	Q8NG98	312 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	GRIN3A	Q8TCU5	1115 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FAM131C	Q96AQ9	280 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ARRDC3	Q96B67	414 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PPP1R9B	Q96SB3	815 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	KDM4C	Q9H3R0	1056 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	NDST4	Q9H3R1	872 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ARHGEF38	Q9NXL2	777 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	STAP1	Q9ULZ2	295 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TBC1D30	Q9Y2I9	924 aa		11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	COL5A1	P20908	1838 aa	Predicted RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms