RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 HADHBP55084 474 aaKnown RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 MRPS21P82921 87 aaKnown RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 NRG1Q02297 640 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 GNA12Q03113 381 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ZNF177Q13360 481 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 DPYSQ14117 519 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 DPYSL3Q14195 570 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 PIGHQ14442 188 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 CRY1Q16526 586 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 DPYSL2Q16555 572 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 KCTD19Q17RG1 926 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 WHAMMP3Q1A5X7 153 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ARL13BQ3SXY8 428 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 MPP7Q5T2T1 576 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TTC39BQ5VTQ0 682 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 C1orf228Q6PIY5 440 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 SERPINA13PQ6UXR4 307 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 RFX8Q6ZV50 586 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 Q6ZVU0 165 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 SYT13Q7L8C5 426 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ARHGAP12Q8IWW6 846 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 RTL3Q8N8U3 475 aaKnown RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TSTD1Q8NFU3 115 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 OR6K2Q8NGY2 324 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TPCN2Q8NHX9 752 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TSC1Q92574 1164 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ZNF419Q96HQ0 510 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 C1orf74Q96LT6 269 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 CSPG4P5Q96PW8 444 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 NELL2Q99435 816 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 GABRG3Q99928 467 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 FEM1AQ9BSK4 669 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 SPON2Q9BUD6 331 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 SLC2A11Q9BYW1 496 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 MKRN2Q9H000 416 aaKnown RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TNKS2Q9H2K2 1166 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TMEM245Q9H330 911 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TMEM248Q9NWD8 314 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 UVRAGQ9P2Y5 699 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 SERGEFQ9UGK8 458 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 VPS28Q9UK41 221 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ERVW-1Q9UQF0 538 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TBC1D30Q9Y2I9 924 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 FCF1Q9Y324 198 aaKnown RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ZFHX2Q9C0A1 2572 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 PLXNA2O75051 1894 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 EFCAB8A8MWE9 144 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 J3KR12 359 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 CBX4O00257 560 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 BNIP3LO60238 219 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 FTCDO95954 541 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 ATP1A1P05023 1023 aaKnown RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 DLDP09622 509 aaKnown RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 SRCP12931 536 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 RHOQP17081 205 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 POLR2EP19388 210 aaKnown RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 DNA2P51530 1060 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 DGKEP52429 567 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 CDH6P55285 790 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 NHLH1Q02575 133 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 ADCY2Q08462 1091 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 ENPP2Q13822 863 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 KRT81Q14533 505 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 FBXO43Q4G163 708 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 NCBP2-AS2Q69YL0 99 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 NPNTQ6UXI9 565 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 LRRC31Q6UY01 552 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 ZNF572Q7Z3I7 529 aaPredicted RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 POLNQ7Z5Q5 900 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 RHOT2Q8IXI1 618 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 SYNPOQ8N3V7 929 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 DEFB119Q8N690 84 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 PQLC3Q8N755 202 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 LRRC57Q8N9N7 239 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 CHST14Q8NCH0 376 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 PCDH19Q8TAB3 1148 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 WFIKKN2Q8TEU8 576 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 FRS2Q8WU20 508 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 ARHGEF2Q92974 986 aaKnown RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 TTC17Q96AE7 1141 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 VOPP1Q96AW1 172 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 RNF25Q96BH1 459 aaPredicted RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 EXOC2Q96KP1 924 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 NSMCE3Q96MG7 304 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 EPAS1Q99814 870 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 TLR10Q9BXR5 811 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 CALN1Q9BXU9 219 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 SLC39A8Q9C0K1 460 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 ATP13A1Q9HD20 1204 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 KIAA1522Q9P206 1035 aaPredicted RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 PPARGC1AQ9UBK2 798 aaKnown RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 SLC8A2Q9UPR5 921 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 HCN4Q9Y3Q4 1203 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 JRKLQ9Y4A0 524 aa8.09□□□□□ -1.11
CCDC40-215ENST00000576033 TP53BP1Q12888 1972 aaPredicted RBP8.09□□□□□ -1.11
CCDC40-215ENST00000576033 CFAP54Q96N23 3096 aa8.09□□□□□ -1.12
CCDC40-215ENST00000576033 ZNF292O60281 2723 aa8.09□□□□□ -1.12
CCDC40-215ENST00000576033 ATXN2Q99700 1313 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms