RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 AAMDCQ9H7C9 122 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 ACTR5Q9H9F9 607 aaPredicted RBP3.56□□□□□ -1.84
CDC27-218ENST00000575830 SEPSECSQ9HD40 501 aaKnown RBP3.56□□□□□ -1.84
CDC27-218ENST00000575830 SIRT3Q9NTG7 399 aaPredicted RBP3.56□□□□□ -1.84
CDC27-218ENST00000575830 THAP1Q9NVV9 213 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 ARL15Q9NXU5 204 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 HDAC6Q9UBN7 1215 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 DERAQ9Y315 318 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 PCDHGB3Q9Y5G1 929 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 CLDN16Q9Y5I7 305 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 SLC4A4Q9Y6R1 1079 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 CKAP5Q14008 2032 aa3.56□□□□□ -1.84
CDC27-218ENST00000575830 MYMKA6NI61 221 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 B4DGG1 531 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 DHX16O60231 1041 aaKnown RBP3.55□□□□□ -1.84
CDC27-218ENST00000575830 NBNO60934 754 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 DDAH2O95865 285 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 TNNT1P13805 278 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 TNFSF8P32971 234 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 CIITAP33076 1130 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 HALP42357 657 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 AARSP49588 968 aaKnown RBP eCLIP3.55□□□□□ -1.84
CDC27-218ENST00000575830 CCT4P50991 539 aaKnown RBP3.55□□□□□ -1.84
CDC27-218ENST00000575830 PGGT1BP53609 377 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 PDCLQ13371 301 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 TIGD6Q17RP2 521 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 C5orf22Q49AR2 442 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 GXYLT1Q4G148 440 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 ARL13AQ5H913 290 aaPredicted RBP3.55□□□□□ -1.84
CDC27-218ENST00000575830 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 ZDHHC17Q8IUH5 632 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 BRSK2Q8IWQ3 736 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 FTSJ3Q8IY81 847 aaKnown RBP3.55□□□□□ -1.84
CDC27-218ENST00000575830 USP38Q8NB14 1042 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 ENGASEQ8NFI3 743 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 B4GALNT2Q8NHY0 566 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 NLRP4Q96MN2 994 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 PAGR1Q9BTK6 254 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 TRIM31Q9BZY9 425 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 FAM234AQ9H0X4 552 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 KLHL31Q9H511 634 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 ITM2CQ9NQX7 267 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 FBXO40Q9UH90 709 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 SLC8A2Q9UPR5 921 aa3.55□□□□□ -1.84
CDC27-218ENST00000575830 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 PROB1E7EW31 1015 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 CRYABP02511 175 aaKnown RBP3.54□□□□□ -1.84
CDC27-218ENST00000575830 LCATP04180 440 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 MYZAPP0CAP1 466 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 FCGR2AP12318 317 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 UNGP13051 313 aaPredicted RBP3.54□□□□□ -1.84
CDC27-218ENST00000575830 CYP4B1P13584 511 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 GNLYP22749 145 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 ARRB2P32121 409 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 RFX2P48378 723 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 THBS3P49746 956 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 RBM5P52756 815 aaKnown RBP eCLIP3.54□□□□□ -1.84
CDC27-218ENST00000575830 P2RX3P56373 397 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 SELENOVP59797 346 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 PTGR1Q14914 329 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 RPE65Q16518 533 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 CTXN3Q4LDR2 81 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 FAM171A1Q5VUB5 890 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 GJB7Q6PEY0 223 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 PARM1Q6UWI2 310 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 BBS12Q6ZW61 710 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 TRAPPC11Q7Z392 1133 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 IGFN1Q86VF2 1251 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 FAM185AQ8N0U4 392 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 SETD9Q8NE22 299 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 TMEM163Q8TC26 289 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 HERVK_113Q902F9 699 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 TWNKQ96RR1 684 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 B3GNT4Q9C0J1 378 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 CLPBQ9H078 707 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.54□□□□□ -1.84
CDC27-218ENST00000575830 EBF3Q9H4W6 596 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 RMI1Q9H9A7 625 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 CHODLQ9H9P2 273 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 TBC1D14Q9P2M4 693 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 UPB1Q9UBR1 384 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 ICKQ9UPZ9 632 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 DNAJC16Q9Y2G8 782 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 MORC2Q9Y6X9 1032 aaPredicted RBP3.54□□□□□ -1.84
CDC27-218ENST00000575830 EVPLQ92817 2033 aa3.54□□□□□ -1.84
CDC27-218ENST00000575830 FAM90A7PA6NKC0 464 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 FAM90A22PA8MWA6 464 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 FAM90A12PA8MX19 464 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 FAM90A23PA8MXZ1 464 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 SMAD6O43541 496 aaKnown RBP3.53□□□□□ -1.84
CDC27-218ENST00000575830 ZC3H11AO75152 810 aaKnown RBP eCLIP3.53□□□□□ -1.84
CDC27-218ENST00000575830 KRT38O76015 456 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 SOX30O94993 753 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 ITGB6P18564 788 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 POLGP54098 1239 aaPredicted RBP3.53□□□□□ -1.84
CDC27-218ENST00000575830 NANOS2P60321 138 aaKnown RBP3.53□□□□□ -1.84
CDC27-218ENST00000575830 PPFIA1Q13136 1202 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 RAPGEF1Q13905 1077 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 TAF5Q15542 800 aa3.53□□□□□ -1.84
CDC27-218ENST00000575830 PRTGQ2VWP7 1150 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms