RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 DHCR24Q15392 516 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 RPS6KA1Q15418 735 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 HADHQ16836 314 aaKnown RBP14.16□□□□□ -0.14
RPAIN-209ENST00000571558 ATP13A4Q4VNC1 1196 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 SCYL2Q6P3W7 929 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 CCNI2Q6ZMN8 369 aaPredicted RBP14.16□□□□□ -0.14
RPAIN-209ENST00000571558 FAM131BQ86XD5 332 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 DDX42Q86XP3 938 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPAIN-209ENST00000571558 MIB1Q86YT6 1006 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 KATNAL2Q8IYT4 538 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 PGBD3Q8N328 593 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 TEKT4Q8WW24 435 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 HMGB4Q8WW32 186 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 NTAN1Q96AB6 310 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 OTUB2Q96DC9 234 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 KLF16Q9BXK1 252 aaPredicted RBP14.16□□□□□ -0.14
RPAIN-209ENST00000571558 ARHGEF4Q9NR80 690 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 ARHGEF38Q9NXL2 777 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 COX16Q9P0S2 106 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 TBC1D14Q9P2M4 693 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 SUSD2Q9UGT4 822 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 APOBEC2Q9Y235 224 aaKnown RBP14.16□□□□□ -0.14
RPAIN-209ENST00000571558 HBS1LQ9Y450 684 aaKnown RBP14.16□□□□□ -0.14
RPAIN-209ENST00000571558 PCDHB9Q9Y5E1 797 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 PLXND1Q9Y4D7 1925 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 PI4KAP42356 2102 aa14.16□□□□□ -0.14
RPAIN-209ENST00000571558 C3orf70A6NLC5 250 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 EIF4E1BA6NMX2 242 aaKnown RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 RARAP10276 462 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 PRLRP16471 622 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ADRA1BP35368 520 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 SSR1P43307 286 aaKnown RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ARSEP51690 589 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 AIF1P55008 147 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 FAM193AP78312 1265 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 COL28A1Q2UY09 1125 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 BOLA3Q53S33 107 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ZC3H12AQ5D1E8 599 aaKnown RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 KCNT1Q5JUK3 1230 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 BRMS1LQ5PSV4 323 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ARTNQ5T4W7 220 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 C19orf48Q6RUI8 117 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 GLRX5Q86SX6 157 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 PSTKQ8IV42 348 aaKnown RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 UBL4BQ8N7F7 174 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 FRMD1Q8N878 549 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 FAM71BQ8TC56 605 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 SNRNP25Q9BV90 132 aaKnown RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ZDHHC5Q9C0B5 715 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ZWILCHQ9H900 591 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 TMPRSS4Q9NRS4 437 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 KIAA1522Q9P206 1035 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 RASAL2Q9UJF2 1139 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 FZD10Q9ULW2 581 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 TCRBV21S2A2A0A5A6 115 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 SLC12A8A0AV02 714 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ADAM23O75077 832 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 GJB3O75712 270 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 CCR1P32246 355 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 RWDD2BP57060 319 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 TBX4P57082 545 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ZXDBP98169 803 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 TAZQ16635 292 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 CA9Q16790 459 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 SMTNL2Q2TAL5 461 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 ERMARDQ5T6L9 678 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 RHBDF2Q6PJF5 856 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 SND1Q7KZF4 910 aaKnown RBP eCLIP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 EXD1Q8NHP7 514 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 OSBPL9Q96SU4 736 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 TKTL2Q9H0I9 626 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 WDCPQ9H6R7 721 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 GPATCH2LQ9NWQ4 482 aa14.15□□□□□ -0.14
RPAIN-209ENST00000571558 DDX56Q9NY93 547 aaKnown RBP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.15□□□□□ -0.14
RPAIN-209ENST00000571558 GON4LQ3T8J9 2241 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 ATXN2Q99700 1313 aaKnown RBP14.14□□□□□ -0.15
RPAIN-209ENST00000571558 CES2O00748 559 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 KCNK3O14649 394 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 GREM1O60565 184 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 FTH1P19P0C7X4 201 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 PYGMP11217 842 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 GNSP15586 552 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 CXCR5P32302 372 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 GJC1P36383 396 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 DNA2P51530 1060 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 COG7P83436 770 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 DPYSL2Q16555 572 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 KIF18AQ8NI77 898 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 RAPGEF5Q92565 580 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 PSMB7Q99436 277 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 MAGEB5Q9BZ81 275 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 NACA2Q9H009 215 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 CARD9Q9H257 536 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.14□□□□□ -0.15
RPAIN-209ENST00000571558 KLHL11Q9NVR0 708 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 AP4E1Q9UPM8 1137 aa14.14□□□□□ -0.15
RPAIN-209ENST00000571558 ACACAQ13085 2346 aa14.13□□□□□ -0.15
RPAIN-209ENST00000571558 ANTXRLA6NF34 631 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms