RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 PLCB1Q9NQ66 1216 aa19.34■□□□□ 0.69
ABCA3-204ENST00000566200 PIGVQ9NUD9 493 aa19.34■□□□□ 0.69
ABCA3-204ENST00000566200 TPX2Q9ULW0 747 aaKnown RBP19.34■□□□□ 0.69
ABCA3-204ENST00000566200 TBC1D30Q9Y2I9 924 aa19.34■□□□□ 0.69
ABCA3-204ENST00000566200 MYLKQ15746 1914 aa19.33■□□□□ 0.69
ABCA3-204ENST00000566200 M0QYT0 321 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 RNF103O00237 685 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 FOXN3O00409 490 aaPredicted RBP19.33■□□□□ 0.68
ABCA3-204ENST00000566200 MCF2LO15068 1137 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 CNTN5O94779 1100 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 MT-CO1P00395 513 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 NOS2P35228 1153 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 RXRGP48443 463 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 TAS2R38P59533 333 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 SLC6A3Q01959 620 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 CAMK4Q16566 473 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 ALFQ53S48 1182 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 ARTNQ5T4W7 220 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 TMPRSS12Q86WS5 348 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 TRIM69Q86WT6 500 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 ZNF397Q8NF99 534 aaPredicted RBP19.33■□□□□ 0.68
ABCA3-204ENST00000566200 PIP4K2CQ8TBX8 421 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 PSMB7Q99436 277 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 NPY6RQ99463 290 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 SLC25A13Q9UJS0 675 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 VPS28Q9UK41 221 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 DNAJC12Q9UKB3 198 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 SNX10Q9Y5X0 201 aa19.33■□□□□ 0.68
ABCA3-204ENST00000566200 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.32■□□□□ 0.68
ABCA3-204ENST00000566200 ALOX15BO15296 676 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 YKT6O15498 198 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 RFPL3O75679 317 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 ADCY5O95622 1261 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 CTSLP07711 333 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 SRCP12931 536 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 ARRB1P49407 418 aaPredicted RBP19.32■□□□□ 0.68
ABCA3-204ENST00000566200 PTK2Q05397 1052 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 ZNF177Q13360 481 aaPredicted RBP19.32■□□□□ 0.68
ABCA3-204ENST00000566200 FAM46CQ5VWP2 391 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 DSG4Q86SJ6 1040 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 PRPF39Q86UA1 669 aaKnown RBP19.32■□□□□ 0.68
ABCA3-204ENST00000566200 SIK2Q9H0K1 926 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 ARHGEF38Q9NXL2 777 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 DMTF1Q9Y222 760 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 HS3ST2Q9Y278 367 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 CA5BQ9Y2D0 317 aa19.32■□□□□ 0.68
ABCA3-204ENST00000566200 ARID1BQ8NFD5 2236 aaPredicted RBP19.32■□□□□ 0.68
ABCA3-204ENST00000566200 A0A087WV48 116 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 K7ERQ8 282 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 SNAP91O60641 907 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 CLDN11O75508 207 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 CXCR3P49682 368 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 CDH4P55283 916 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 SLC45A4Q5BKX6 768 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 PIP5KL1Q5T9C9 394 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 IQCHQ86VS3 1027 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 FAM71AQ8IYT1 594 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 NT5C3BQ969T7 300 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 CRELD1Q96HD1 420 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 NOX5Q96PH1 765 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 TMPRSS4Q9NRS4 437 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 IGSF10Q6WRI0 2623 aa19.31■□□□□ 0.68
ABCA3-204ENST00000566200 DOCK4Q8N1I0 1966 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 E9PAM4 449 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 C1QTNF3-AMACRE9PGA6 284 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 BNIP3LO60238 219 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 KRT9P35527 623 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 MTA1Q13330 715 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 FBXL19Q6PCT2 694 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 OXR1Q8N573 874 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 OR2A12Q8NGT7 310 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 LRIG1Q96JA1 1093 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 BBC3Q96PG8 261 aaPredicted RBP19.3■□□□□ 0.68
ABCA3-204ENST00000566200 PPP1R9BQ96SB3 815 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 TKTL2Q9H0I9 626 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 CAAP1Q9H8G2 361 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 VPS51Q9UID3 782 aa19.3■□□□□ 0.68
ABCA3-204ENST00000566200 URB1O60287 2271 aaKnown RBP19.3■□□□□ 0.68
ABCA3-204ENST00000566200 A0A0D9SEW6 157 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 SMAD6O43541 496 aaKnown RBP19.29■□□□□ 0.68
ABCA3-204ENST00000566200 SDC3O75056 442 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 C1SP09871 688 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 CDH5P33151 784 aaPredicted RBP19.29■□□□□ 0.68
ABCA3-204ENST00000566200 NUDT1P36639 197 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 MTIF2P46199 727 aaKnown RBP19.29■□□□□ 0.68
ABCA3-204ENST00000566200 ACAP1Q15027 740 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 MIIPQ5JXC2 388 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 SMYD5Q6GMV2 418 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 TRNP1Q6NT89 227 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 TMEM145Q8NBT3 493 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 ARRDC3Q96B67 414 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 PGAP3Q96FM1 320 aaPredicted RBP19.29■□□□□ 0.68
ABCA3-204ENST00000566200 MUC3BQ9H195 1237 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 PREBQ9HCU5 417 aa19.29■□□□□ 0.68
ABCA3-204ENST00000566200 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.29■□□□□ 0.68
ABCA3-204ENST00000566200 SMG1Q96Q15 3661 aaKnown RBP19.29■□□□□ 0.68
ABCA3-204ENST00000566200 FAM170AA1A519 330 aa19.28■□□□□ 0.68
ABCA3-204ENST00000566200 DRGXA6NNA5 263 aa19.28■□□□□ 0.68
ABCA3-204ENST00000566200 PRAMEF26H0Y7S4 382 aa19.28■□□□□ 0.68
ABCA3-204ENST00000566200 RNGTTO60942 597 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms