RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ORAI3Q9BRQ5 295 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 C2orf49Q9BVC5 232 aaPredicted RBP18.14■□□□□ 0.49
NME3-205ENST00000563854 ACE2Q9BYF1 805 aaPredicted RBP18.14■□□□□ 0.49
NME3-205ENST00000563854 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 VPS51Q9UID3 782 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 PCOLCE2Q9UKZ9 415 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D30Q9Y2I9 924 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 SIK3Q9Y2K2 1263 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 CEP295Q9C0D2 2601 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 LGALS16A8MUM7 142 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 C1QTNF3-AMACRE9PGA6 284 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 RTN2O75298 545 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 FTH1P19P0C7X4 201 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 SRCP12931 536 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 OR1E1P30953 314 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 DRD3P35462 400 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 PPP2CBP62714 309 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 PPP2CAP67775 309 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 ZNF423Q2M1K9 1284 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 C15orf59Q2T9L4 293 aaPredicted RBP18.13■□□□□ 0.49
NME3-205ENST00000563854 RAB6CQ53S08 254 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 KCNT1Q5JUK3 1230 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 C6orf118Q5T5N4 469 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 CCDC183Q5T5S1 534 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 FAM46CQ5VWP2 391 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 LINGO4Q6UY18 593 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 ZNF683Q8IZ20 524 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 AOPEPQ8N6M6 819 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 PIP4K2CQ8TBX8 421 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 SPON2Q9BUD6 331 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 RAB6CQ9H0N0 254 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 EBF2Q9HAK2 575 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 LIMA1Q9UHB6 759 aaKnown RBP18.13■□□□□ 0.49
NME3-205ENST00000563854 SARDHQ9UL12 918 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 TMEM131Q92545 1883 aa18.13■□□□□ 0.49
NME3-205ENST00000563854 A0A0D9SEW6 157 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 GOLGA8CPA6NN73 597 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 H0Y8X5 98 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 K7ERQ8 282 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 FLRT2O43155 660 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 MBD3O95983 291 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 MT-CO1P00395 513 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 CYP1A1P04798 512 aaPredicted RBP18.12■□□□□ 0.49
NME3-205ENST00000563854 ZNF883P0CG24 379 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 MMP8P22894 467 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 RRM1P23921 792 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 MAT2AP31153 395 aaKnown RBP18.12■□□□□ 0.49
NME3-205ENST00000563854 SDC4P31431 198 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 NSFP46459 744 aaKnown RBP18.12■□□□□ 0.49
NME3-205ENST00000563854 CCT8P50990 548 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 RACK1P63244 317 aaKnown RBP18.12■□□□□ 0.49
NME3-205ENST00000563854 TRIM72Q6ZMU5 477 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 SETD3Q86TU7 594 aaPredicted RBP18.12■□□□□ 0.49
NME3-205ENST00000563854 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 DCAF4L2Q8NA75 395 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 OR7D4Q8NG98 312 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 JOSD2Q8TAC2 188 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 RHBDD1Q8TEB9 315 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 RXFP2Q8WXD0 754 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 SERAC1Q96JX3 654 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 BTBD3Q9Y2F9 522 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 FARP1Q9Y4F1 1045 aaPredicted RBP18.12■□□□□ 0.49
NME3-205ENST00000563854 FRYQ5TBA9 3013 aa18.12■□□□□ 0.49
NME3-205ENST00000563854 DRGXA6NNA5 263 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 CBX4O00257 560 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 ENDOD1O94919 500 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 TRIM16O95361 564 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 PROS1P07225 676 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 GLDCP23378 1020 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 CTSKP43235 329 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 CCR5P51681 352 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 CNTN1Q12860 1018 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 SUZ12Q15022 739 aaKnown RBP18.11■□□□□ 0.49
NME3-205ENST00000563854 PRAMEF14Q5SWL7 426 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 SKA1Q96BD8 255 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 C1orf74Q96LT6 269 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 CCDC114Q96M63 670 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 HAPLN3Q96S86 360 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 PCDHB18PQ96TA0 734 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 ZYG11BQ9C0D3 744 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 TNKS2Q9H2K2 1166 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 TMEM51Q9NW97 253 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 APOBEC2Q9Y235 224 aaKnown RBP18.11■□□□□ 0.49
NME3-205ENST00000563854 HS3ST2Q9Y278 367 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 DAAM1Q9Y4D1 1078 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 NEUROG3Q9Y4Z2 214 aa18.11■□□□□ 0.49
NME3-205ENST00000563854 IGLV3-10A0A075B6K4 115 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 KPNA3O00505 521 aaPredicted RBP18.1■□□□□ 0.49
NME3-205ENST00000563854 WNT9AO14904 365 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 MCF2LO15068 1137 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 VILLO15195 856 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 ALOX15BO15296 676 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 SMAD6O43541 496 aaKnown RBP18.1■□□□□ 0.49
NME3-205ENST00000563854 CBFA2T3O75081 653 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 WNT1P04628 370 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 CD38P28907 300 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
NME3-205ENST00000563854 TYRO3Q06418 890 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 ARL13BQ3SXY8 428 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 CCDC14Q49A88 953 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms