RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 HS3ST2Q9Y278 367 aa13.73□□□□□ -0.21
CLK3-213ENST00000563842 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.73□□□□□ -0.21
CLK3-213ENST00000563842 ADAMTS9Q9P2N4 1935 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 ALOX15BO15296 676 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
CLK3-213ENST00000563842 LRIG2O94898 1065 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 GNSP15586 552 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 PTGER3P43115 390 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 GEMIN4P57678 1058 aaKnown RBP13.72□□□□□ -0.21
CLK3-213ENST00000563842 GNA12Q03113 381 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 SF3A2Q15428 464 aaKnown RBP13.72□□□□□ -0.21
CLK3-213ENST00000563842 DLG2Q15700 870 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 CST6Q15828 149 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 CCDC6Q16204 474 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 DUOXA1Q1HG43 343 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 RSPO4Q2I0M5 234 aaPredicted RBP13.72□□□□□ -0.21
CLK3-213ENST00000563842 FAM46CQ5VWP2 391 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 ALKBH5Q6P6C2 394 aaKnown RBP13.72□□□□□ -0.21
CLK3-213ENST00000563842 CACUL1Q86Y37 369 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 VSTM4Q8IW00 320 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 RGL4Q8IZJ4 473 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 ATP11CQ8NB49 1132 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 GANCQ8TET4 914 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 HSPA12BQ96MM6 686 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 GPR174Q9BXC1 333 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 MAGEH1Q9H213 219 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 PABPC3Q9H361 631 aaKnown RBP13.72□□□□□ -0.21
CLK3-213ENST00000563842 CATSPERBQ9H7T0 1116 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 VPS51Q9UID3 782 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 PILRBQ9UKJ0 227 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 HPCAL4Q9UM19 191 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 BAHCC1Q9P281 2608 aa13.72□□□□□ -0.21
CLK3-213ENST00000563842 A0A0D9SEW6 157 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.71□□□□□ -0.21
CLK3-213ENST00000563842 METTL12A8MUP2 240 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 MEI4A8MW99 385 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 C1QTNF3-AMACRE9PGA6 284 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 FGF10O15520 208 aaPredicted RBP13.71□□□□□ -0.21
CLK3-213ENST00000563842 KRT37O76014 449 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 C5AR1P21730 350 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 ITPKAP23677 461 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 EPHB2P29323 1055 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 ZNF135P52742 658 aaPredicted RBP13.71□□□□□ -0.21
CLK3-213ENST00000563842 LIMK1P53667 647 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 OGDHQ02218 1023 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 CCDC122Q5T0U0 273 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 ERMARDQ5T6L9 678 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 PEAR1Q5VY43 1037 aaPredicted RBP13.71□□□□□ -0.21
CLK3-213ENST00000563842 IL31Q6EBC2 164 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 FAM124AQ86V42 546 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 PSTKQ8IV42 348 aaKnown RBP13.71□□□□□ -0.21
CLK3-213ENST00000563842 MMAAQ8IVH4 418 aaKnown RBP13.71□□□□□ -0.21
CLK3-213ENST00000563842 SLC41A1Q8IVJ1 513 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 STK40Q8N2I9 435 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 DEFB119Q8N690 84 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 FRS2Q8WU20 508 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 FAM129BQ96TA1 746 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 PSMB7Q99436 277 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 OMDQ99983 421 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 RTKNQ9BST9 563 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 DEF6Q9H4E7 631 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 MTG2Q9H4K7 406 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 CD93Q9NPY3 652 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 FBXL12Q9NXK8 326 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 DLL3Q9NYJ7 618 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 ZNF212Q9UDV6 495 aa13.71□□□□□ -0.21
CLK3-213ENST00000563842 DCHS1Q96JQ0 3298 aa13.71□□□□□ -0.22
CLK3-213ENST00000563842 A0A087X0T9 212 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 SSU72P8A0A1W2PR75 194 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 FAM72CH0Y354 149 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 CBX4O00257 560 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 MCF2LO15068 1137 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 MID1O15344 667 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 CREB3O43889 395 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 PRPSAP2O60256 369 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 SNAP91O60641 907 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 RAMP2O60895 175 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 SEMA4FO95754 770 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 IL1BP01584 269 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 FAM228BP0C875 321 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 SRCP12931 536 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 SLC8A1P32418 973 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 PCK1P35558 622 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 RECQLP46063 649 aaPredicted RBP13.7□□□□□ -0.22
CLK3-213ENST00000563842 NUMBP49757 651 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 CCDC15Q0P6D6 951 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
CLK3-213ENST00000563842 POLD3Q15054 466 aaPredicted RBP13.7□□□□□ -0.22
CLK3-213ENST00000563842 TRIM61Q5EBN2 209 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 ARTNQ5T4W7 220 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 FAM72AQ5TYM5 149 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 FAM72DQ6L9T8 149 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 SLC23A3Q6PIS1 610 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 SARM1Q6SZW1 724 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 NLRP14Q86W24 1093 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 FAM72BQ86X60 149 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 CNGA4Q8IV77 575 aa13.7□□□□□ -0.22
CLK3-213ENST00000563842 OR7D4Q8NG98 312 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms