RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 BNIP3Q12983 259 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 C19orf48Q6RUI8 117 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 DHRS13Q6UX07 377 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 PRPF39Q86UA1 669 aaKnown RBP16.17■□□□□ 0.18
CLK3-211ENST00000563297 ZDHHC17Q8IUH5 632 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 SH2D3CQ8N5H7 860 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 MFSD2AQ8NA29 543 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 PIP4K2CQ8TBX8 421 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 NT5C3BQ969T7 300 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 TKTL2Q9H0I9 626 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 NDST4Q9H3R1 872 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 SYNCQ9H7C4 482 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 ARHGEF38Q9NXL2 777 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 RRN3Q9NYV6 651 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.17■□□□□ 0.18
CLK3-211ENST00000563297 DKK4Q9UBT3 224 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 VPS28Q9UK41 221 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 COL5A1P20908 1838 aaPredicted RBP16.17■□□□□ 0.18
CLK3-211ENST00000563297 ATRXP46100 2492 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 ASXL3Q9C0F0 2248 aa16.17■□□□□ 0.18
CLK3-211ENST00000563297 CBX4O00257 560 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 ENC1O14682 589 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 ALOX15BO15296 676 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 LDOC1O95751 146 aaPredicted RBP16.16■□□□□ 0.18
CLK3-211ENST00000563297 MT-CO1P00395 513 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 ZNF18P17022 549 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 MAT2AP31153 395 aaKnown RBP16.16■□□□□ 0.18
CLK3-211ENST00000563297 CDH5P33151 784 aaPredicted RBP16.16■□□□□ 0.18
CLK3-211ENST00000563297 GABRB2P47870 512 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 RXRGP48443 463 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 KCNMA1Q12791 1236 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 CNTN1Q12860 1018 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 DRAP1Q14919 205 aaPredicted RBP16.16■□□□□ 0.18
CLK3-211ENST00000563297 POM121L1PQ3SYA9 428 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 VWA3BQ502W6 1294 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 ALFQ53S48 1182 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 SLC45A4Q5BKX6 768 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 MIIPQ5JXC2 388 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 BRMS1LQ5PSV4 323 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 NAPEPLDQ6IQ20 393 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 Q6ZVU0 165 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 SPATS2Q86XZ4 545 aaKnown RBP16.16■□□□□ 0.18
CLK3-211ENST00000563297 ZNF683Q8IZ20 524 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 EID2Q8N6I1 236 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 TMEM35BQ8NCS4 154 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 PGAP3Q96FM1 320 aaPredicted RBP16.16■□□□□ 0.18
CLK3-211ENST00000563297 PSMB7Q99436 277 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 TUBGCP2Q9BSJ2 902 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 ERVMER34-1Q9H9K5 563 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 HS3ST2Q9Y278 367 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 SNX10Q9Y5X0 201 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 CELSR3Q9NYQ7 3312 aa16.16■□□□□ 0.18
CLK3-211ENST00000563297 DOCK4Q8N1I0 1966 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 DRGXA6NNA5 263 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 C1QTNF3-AMACRE9PGA6 284 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 YKT6O15498 198 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 BNIP3LO60238 219 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 SRCP12931 536 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 ARRB1P49407 418 aaPredicted RBP16.15■□□□□ 0.18
CLK3-211ENST00000563297 CYP4F3Q08477 520 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 ARTNQ5T4W7 220 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 AGBL4Q5VU57 503 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 IQCHQ86VS3 1027 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 TRIM69Q86WT6 500 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 FAM114A1Q8IWE2 563 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 C18orf8Q96DM3 657 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 CNDP2Q96KP4 475 aaKnown RBP16.15■□□□□ 0.18
CLK3-211ENST00000563297 MUC3BQ9H195 1237 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 DMTF1Q9Y222 760 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 RAXQ9Y2V3 346 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 PCDHGA1Q9Y5H4 931 aa16.15■□□□□ 0.18
CLK3-211ENST00000563297 TDRD6O60522 2096 aaKnown RBP16.14■□□□□ 0.17
CLK3-211ENST00000563297 K7ERQ8 282 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 SNAP91O60641 907 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 F9P00740 461 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 CTSLP07711 333 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 RHOCP08134 193 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 PRKCSHP14314 528 aaPredicted RBP16.14■□□□□ 0.17
CLK3-211ENST00000563297 CYP11B1P15538 503 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 EPHA8P29322 1005 aaPredicted RBP16.14■□□□□ 0.17
CLK3-211ENST00000563297 NUDT1P36639 197 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 SULT1E1P49888 294 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 TAS2R38P59533 333 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 KRT83P78385 493 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 DEUP1Q05D60 604 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 DNAJC3Q13217 504 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 STAT4Q14765 748 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 SLC25A52Q3SY17 297 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 HSP90AA4PQ58FG1 418 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 KLHDC7AQ5VTJ3 777 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 KANSL1Q7Z3B3 1105 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 TMPRSS12Q86WS5 348 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 XYLT1Q86Y38 959 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
CLK3-211ENST00000563297 ATP11CQ8NB49 1132 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 TSC1Q92574 1164 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 C1orf74Q96LT6 269 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 TBCBQ99426 244 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 TMPRSS4Q9NRS4 437 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms