RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RBM43Q6ZSC3 357 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 HJURPQ8NCD3 748 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 TRDMT1O14717 391 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 KPNA5O15131 536 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 RARAP10276 462 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 HOXB8P17481 243 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CCND1P24385 295 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CDC25CP30307 473 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 HPCAL1P37235 193 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF143P52747 638 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 SMARCB1Q12824 385 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 TRAF2Q12933 501 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 PKN2Q16513 984 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 GSTA3Q16772 222 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CXorf40BQ96DE9 158 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 NXF3Q9H4D5 531 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 DDX28Q9NUL7 540 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 MROH1Q8NDA8 1641 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 SH3BGRLO75368 114 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 BGNP21810 368 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 GNA13Q14344 377 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 NEPROQ6NW34 567 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 SLC24A5Q71RS6 500 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 ANKRD23Q86SG2 305 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 MAB21L3Q8N8X9 362 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 USP7Q93009 1102 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 TSPAN18Q96SJ8 248 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 RERGLQ9H628 205 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 ZFYVE1Q9HBF4 777 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 SYBUQ9NX95 663 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 GPSM3Q9Y4H4 160 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 RGS5O15539 181 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 FARP2O94887 1054 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-208ENST00000560371 PSMB4P28070 264 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 ELMO1Q92556 727 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 CNBD2Q96M20 576 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 COMMD8Q9NX08 183 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 RIC1Q4ADV7 1423 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 CNPP09543 421 aaKnown RBP13.66□□□□□ -0.22
TRAF3-208ENST00000560371 CRYMQ14894 314 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF544Q6NX49 715 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 CNGB3Q9NQW8 809 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 GNPTGQ9UJJ9 305 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 HAO1Q9UJM8 370 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 CCDC154A6NI56 674 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 DUSP11O75319 330 aaKnown RBP13.66□□□□□ -0.22
TRAF3-208ENST00000560371 EIF2S1P05198 315 aaKnown RBP13.66□□□□□ -0.22
TRAF3-208ENST00000560371 SPATA31D3P0C874 917 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 PCYT1AP49585 367 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 SPATA31D4Q6ZUB0 917 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 VTI1BQ9UEU0 232 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 DMGDHQ9UI17 866 aaKnown RBP13.66□□□□□ -0.22
TRAF3-208ENST00000560371 A0A0A0MRY4 1105 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 TRIM13O60858 407 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 ATP4AP20648 1035 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 TTPAP49638 278 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 TUSC3Q13454 348 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 SCUBE1Q8IWY4 988 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 SPATA13Q96N96 652 aa13.66□□□□□ -0.22
TRAF3-208ENST00000560371 ASTN2O75129 1339 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-208ENST00000560371 FAM220BPB1ANY3 271 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 RGS14O43566 566 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 SLURP2P0DP57 97 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 FAM126BQ8IXS8 530 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 KAT5Q92993 513 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 KCTD14Q9BQ13 255 aaPredicted RBP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 CCDC189A1A4V9 331 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 OR6C75A6NL08 312 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 DAB1O75553 588 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF697Q5TEC3 545 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 USP6NLQ92738 828 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 CDHR5Q9HBB8 845 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 SAE1Q9UBE0 346 aaPredicted RBP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 HNRNPCP07910 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 GLI1P08151 1106 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 KCNA3P22001 575 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 CALB2P22676 271 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 DPYSL3Q14195 570 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 RCN1Q15293 331 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 TSC22D1Q15714 1073 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 LUZP2Q86TE4 346 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 CYP4X1Q8N118 509 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 GPR152Q8TDT2 470 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 VPS33AQ96AX1 596 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 DNAJC1Q96KC8 554 aaKnown RBP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF510Q9Y2H8 683 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 C1orf232A0A0U1RR37 186 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 VAC14Q08AM6 782 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms