RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SGK1O00141 431 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 DDX3YO15523 660 aaKnown RBP22.18■■□□□ 1.14
SNX1-206ENST00000559389 MFSD11O43934 449 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 ZRANB2O95218 330 aaKnown RBP eCLIP22.18■■□□□ 1.14
SNX1-206ENST00000559389 GLDCP23378 1020 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 PRKCHP24723 683 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 STK19P49842 368 aaPredicted RBP22.18■■□□□ 1.14
SNX1-206ENST00000559389 VASPP50552 380 aaPredicted RBP22.18■■□□□ 1.14
SNX1-206ENST00000559389 RWDD2BP57060 319 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 ARF5P84085 180 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 PAFAH1B3Q15102 231 aaKnown RBP22.18■■□□□ 1.14
SNX1-206ENST00000559389 FNDC3BQ53EP0 1204 aaKnown RBP22.18■■□□□ 1.14
SNX1-206ENST00000559389 EOGTQ5NDL2 527 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 SLC9A4Q6AI14 798 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 MAMSTRQ6ZN01 415 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 SYT13Q7L8C5 426 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 RCOR2Q8IZ40 523 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 UBL4BQ8N7F7 174 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 KDM1BQ8NB78 822 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 DTWD2Q8NBA8 298 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 UBE2Q2Q8WVN8 375 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 LRFN3Q9BTN0 628 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 SLC39A8Q9C0K1 460 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 TMEM245Q9H330 911 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 PLA2G4CQ9UP65 541 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 HS3ST2Q9Y278 367 aa22.18■■□□□ 1.14
SNX1-206ENST00000559389 A0A0C4DFX4 3053 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 CXorf51AA0A1B0GTR3 108 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 GOLGA6L9A6NEM1 432 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 CBX4O00257 560 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 SERINC3Q13530 473 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 PPP2R5EQ16537 467 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 TFDP3Q5H9I0 405 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 SERPINA13PQ6UXR4 307 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 SPATA6Q9NWH7 488 aaPredicted RBP22.17■■□□□ 1.14
SNX1-206ENST00000559389 C2orf42Q9NWW7 574 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 SLC25A13Q9UJS0 675 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 TRIOO75962 3097 aa22.17■■□□□ 1.14
SNX1-206ENST00000559389 hCG_1818297A0A087WSY0 165 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 ARHGAP42A6NI28 874 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 KDELR3O43731 214 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 HOXB2P14652 356 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 PTPN7P35236 360 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 WASP42768 502 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 CCR3P51677 355 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 COPS2P61201 443 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 ST8SIA6P61647 398 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 MEI1Q5TIA1 1274 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 CCDC50Q8IVM0 306 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 TP53INP2Q8IXH6 220 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 PLD5Q8N7P1 536 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 NETO2Q8NC67 525 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.16■■□□□ 1.14
SNX1-206ENST00000559389 RPL10LQ96L21 214 aaKnown RBP22.16■■□□□ 1.14
SNX1-206ENST00000559389 PRDM16Q9HAZ2 1276 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 PRMT8Q9NR22 394 aaPredicted RBP22.16■■□□□ 1.14
SNX1-206ENST00000559389 CKAP5Q14008 2032 aa22.16■■□□□ 1.14
SNX1-206ENST00000559389 WASH3PC4AMC7 463 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 APOL1O14791 398 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 PAPSS2O95340 614 aaPredicted RBP22.15■■□□□ 1.14
SNX1-206ENST00000559389 SERPINH1P50454 418 aaKnown RBP22.15■■□□□ 1.14
SNX1-206ENST00000559389 PAPOLAP51003 745 aaKnown RBP22.15■■□□□ 1.14
SNX1-206ENST00000559389 SATB1Q01826 763 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 CRY1Q16526 586 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 DCAF12L1Q5VU92 463 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 SDE2Q6IQ49 451 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 RETSATQ6NUM9 610 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 LINGO4Q6UY18 593 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 RFX6Q8HWS3 928 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 SH2D3CQ8N5H7 860 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 PDFQ9HBH1 243 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 CD248Q9HCU0 757 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 KCND1Q9NSA2 647 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 POLR3BQ9NW08 1133 aaPredicted RBP22.15■■□□□ 1.14
SNX1-206ENST00000559389 SLCO3A1Q9UIG8 710 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 HPCAL4Q9UM19 191 aa22.15■■□□□ 1.14
SNX1-206ENST00000559389 A0A1W2PQF6 199 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 ZSCAN5CA6NGD5 496 aaPredicted RBP22.14■■□□□ 1.13
SNX1-206ENST00000559389 DFFAO00273 331 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 ATP9BO43861 1147 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 SRCP12931 536 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 KRT10P13645 584 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 HLA-EP13747 358 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 COL9A1P20849 921 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 DNA2P51530 1060 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 CLCN6P51797 869 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 GEMIN4P57678 1058 aaKnown RBP22.14■■□□□ 1.13
SNX1-206ENST00000559389 GBE1Q04446 702 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 GALNT2Q10471 571 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 TMEM92Q6UXU6 159 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 ZNF354CQ86Y25 554 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 MAK16Q9BXY0 300 aaKnown RBP22.14■■□□□ 1.13
SNX1-206ENST00000559389 RAD54BQ9Y620 910 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 ATG2BQ96BY7 2078 aa22.14■■□□□ 1.13
SNX1-206ENST00000559389 PRAMEF11O60813 436 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 CD160O95971 181 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 MT-CO1P00395 513 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 PYGMP11217 842 aa22.13■■□□□ 1.13
SNX1-206ENST00000559389 ZFXP17010 805 aaPredicted RBP22.13■■□□□ 1.13
SNX1-206ENST00000559389 NNMTP40261 264 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms