RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 LZTS1Q9Y250 596 aa12.39□□□□□ -0.43
SEC11A-206ENST00000558924 TM7SF2O76062 418 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 SNAI1O95863 264 aaPredicted RBP12.38□□□□□ -0.43
SEC11A-206ENST00000558924 JCHAINP01591 159 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 TFAP2AP05549 437 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 CCDC166P0CW27 439 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 NAA20P61599 178 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 SOX4Q06945 474 aaPredicted RBP12.38□□□□□ -0.43
SEC11A-206ENST00000558924 BST2Q10589 180 aaKnown RBP12.38□□□□□ -0.43
SEC11A-206ENST00000558924 MYLK3Q32MK0 819 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 C14orf80Q86SX3 495 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 SLC15A3Q8IY34 581 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 HTR3CQ8WXA8 447 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 PPP2R3CQ969Q6 453 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 CSPG4P5Q96PW8 444 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 BCO2Q9BYV7 579 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 CNTN6Q9UQ52 1028 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 BUD23O43709 281 aaKnown RBP12.38□□□□□ -0.43
SEC11A-206ENST00000558924 SIN3BO75182 1162 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 MMP3P08254 477 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 ATICP31939 592 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 HUNKP57058 714 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 FAM219BQ5XKK7 198 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 TAPT1Q6NXT6 567 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 SKA1Q96BD8 255 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 OLFM3Q96PB7 478 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 C16orf70Q9BSU1 422 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 UBQLN1Q9UMX0 589 aaKnown RBP12.38□□□□□ -0.43
SEC11A-206ENST00000558924 HNRNPCL1O60812 293 aaKnown RBP12.38□□□□□ -0.43
SEC11A-206ENST00000558924 PMPCBO75439 489 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 CD1EP15812 388 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 BCAT1P54687 386 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 PLIN5Q00G26 463 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 PRPSAP1Q14558 356 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 AMIGO2Q86SJ2 522 aa12.38□□□□□ -0.43
SEC11A-206ENST00000558924 C15orf38-AP3S2A0A0A6YYH1 394 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 LSM1O15116 133 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SLC5A2P31639 672 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SLC12A1Q13621 1099 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 FRMD7Q6ZUT3 714 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 ARPINQ7Z6K5 226 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 IPMKQ8NFU5 416 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 GPR152Q8TDT2 470 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 KCNK4Q9NYG8 393 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TMEM216Q9P0N5 145 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SSX2IPQ9Y2D8 614 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SNX13Q9Y5W8 968 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 ATP6AP2A0A1C7CYW4 349 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TMX2-CTNND1H3BSU7 103 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 ADCY6O43306 1168 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 NDUFB5O43674 189 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 ATP6AP2O75787 350 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.434e-11■■□□□ 13.5
SEC11A-206ENST00000558924 SCNN1GP51170 649 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 RPS27LQ71UM5 84 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 BRI3BPQ8WY22 251 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 EMID1Q96A84 441 aaPredicted RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TNIP3Q96KP6 325 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 GBA2Q9HCG7 927 aaPredicted RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 S100A14Q9HCY8 104 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 DTLQ9NZJ0 730 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SPATA7Q9P0W8 599 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TLK1Q9UKI8 766 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 MYO9BQ13459 2157 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TCRBV5S1A1TA0A578 114 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 GPC4O75487 556 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 BDNFP23560 247 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 RPL10P27635 214 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 CRABP2P29373 138 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 GJA8P48165 433 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 MRPS5P82675 430 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 PDK2Q15119 407 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 C6orf183Q5T699 404 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 B3GNT6Q6ZMB0 384 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 STRA8Q7Z7C7 330 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 PPTC7Q8NI37 304 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 RNF139Q8WU17 664 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SREK1Q8WXA9 508 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TMIGD2Q96BF3 282 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 DGCR14Q96DF8 476 aaKnown RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 P2RY11Q96G91 374 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 LENG8Q96PV6 779 aaPredicted RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 SYT17Q9BSW7 474 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 ABHD16BQ9H3Z7 469 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 THAP1Q9NVV9 213 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 PRG3Q9Y2Y8 225 aaPredicted RBP12.37□□□□□ -0.43
SEC11A-206ENST00000558924 TTC3P53804 2025 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
SEC11A-206ENST00000558924 BPGMP07738 259 aa12.36□□□□□ -0.43
SEC11A-206ENST00000558924 PFKMP08237 780 aa12.36□□□□□ -0.43
SEC11A-206ENST00000558924 PROZP22891 400 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms