RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 LPAL2Q16609 132 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 ACCSLQ4AC99 568 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 TXNRD3NBQ6F5E7 133 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 RFX8Q6ZV50 586 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 ZNF354CQ86Y25 554 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 CACUL1Q86Y37 369 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 CPNE8Q86YQ8 564 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 ATP11CQ8NB49 1132 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 TEKT4Q8WW24 435 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-205ENST00000558428 ARHGEF2Q92974 986 aaKnown RBP12.65□□□□□ -0.38
SMAD3-205ENST00000558428 SIPA1Q96FS4 1042 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 SPACA7Q96KW9 195 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 MAGEH1Q9H213 219 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 FBRSQ9HAH7 460 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMAD3-205ENST00000558428 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 NUMA1Q14980 2115 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 PTPRZ1P23471 2315 aaPredicted RBP12.65□□□□□ -0.39
SMAD3-205ENST00000558428 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.39
SMAD3-205ENST00000558428 EP300Q09472 2414 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-205ENST00000558428 FRYLO94915 3013 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 PIEZO1Q92508 2521 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
SMAD3-205ENST00000558428 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 GOLGA6L3A6NEY3 463 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 H3BRJ5 948 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 ATP9BO43861 1147 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 ZNF217O75362 1048 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 MT-CO1P00395 513 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 ACADMP11310 421 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 SRCP12931 536 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 VAV1P15498 845 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 ERCC2P18074 760 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 MAN1A1P33908 653 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 ARHGAP25P42331 645 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 NOP2P46087 812 aaKnown RBP12.64□□□□□ -0.39
SMAD3-205ENST00000558428 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-205ENST00000558428 GSDMDP57764 484 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 KRT81Q14533 505 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 DLG2Q15700 870 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 C9orf64Q5T6V5 341 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 RETSATQ6NUM9 610 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 LINGO4Q6UY18 593 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 ASCL5Q7RTU5 278 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 C11orf74Q86VG3 221 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 TMEM139Q8IV31 216 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 SH2D3CQ8N5H7 860 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 PTPRN2Q92932 1015 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 ACE2Q9BYF1 805 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-205ENST00000558428 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 PCDH18Q9HCL0 1135 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 CD93Q9NPY3 652 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 CWC15Q9P013 229 aaKnown RBP12.64□□□□□ -0.39
SMAD3-205ENST00000558428 HPCAL4Q9UM19 191 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 CYP8B1Q9UNU6 501 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 HS3ST2Q9Y278 367 aa12.64□□□□□ -0.39
SMAD3-205ENST00000558428 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 RASA4BC9J798 803 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 K7ERQ8 282 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 RASA4O43374 803 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 BNIP3LO60238 219 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 GFRA3O60609 400 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 RNASEH1O60930 286 aaKnown RBP12.63□□□□□ -0.39
SMAD3-205ENST00000558428 ZMPSTE24O75844 475 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 KRT7P08729 469 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 BCKDHBP21953 392 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 HCAR3P49019 387 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 CDH6P55285 790 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 YBEYP58557 167 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-205ENST00000558428 TAS2R40P59535 323 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 ARF5P84085 180 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 MAP7D1Q3KQU3 841 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 PLK5Q496M5 336 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 ZFYVE27Q5T4F4 411 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 ZNF776Q68DI1 518 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-205ENST00000558428 Q6ZVU0 165 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 POLNQ7Z5Q5 900 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 KBTBD6Q86V97 674 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 UMODL1-AS1Q8N2C9 162 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 FAM160A2Q8N612 972 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-205ENST00000558428 FRMD1Q8N878 549 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 ACRBPQ8NEB7 543 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 FRS2Q8WU20 508 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 HMCESQ96FZ2 354 aa12.63□□□□□ -0.39
SMAD3-205ENST00000558428 NOL6Q9H6R4 1146 aaKnown RBP12.63□□□□□ -0.39
SMAD3-205ENST00000558428 IGHV1OR15-9A0A0B4J2B8 117 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 MAP3K13O43283 966 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 SMAD6O43541 496 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 KDELR3O43731 214 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 DNTTP04053 509 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 AMPD1P23109 780 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 MRE11P49959 708 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 SERPINH1P50454 418 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 CLCN6P51797 869 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms