RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TP53INP2Q8IXH6 220 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 SYNPOQ8N3V7 929 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 USP33Q8TEY7 942 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 ACE2Q9BYF1 805 aaPredicted RBP21.75■■□□□ 1.07
CASC4-204ENST00000557945 SLC25A13Q9UJS0 675 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 ERVW-1Q9UQF0 538 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 HEY1Q9Y5J3 304 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 MAP3K6O95382 1288 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 ST8SIA6P61647 398 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 SERINC3Q13530 473 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 E2F5Q15329 346 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 SEL1L2Q5TEA6 688 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 LINGO4Q6UY18 593 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 CHPFQ8IZ52 775 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 PLD5Q8N7P1 536 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 RPLP0P6Q8NHW5 317 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 ACDQ96AP0 544 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 CLDN23Q96B33 292 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 RPL10LQ96L21 214 aaKnown RBP21.74■■□□□ 1.07
CASC4-204ENST00000557945 HCN2Q9UL51 889 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 TRIOO75962 3097 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 FAM86C2PA6NEL3 165 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 PI15O43692 258 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 KDELR3O43731 214 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 KLF8O95600 359 aaPredicted RBP21.74■■□□□ 1.07
CASC4-204ENST00000557945 ATP1A1P05023 1023 aaKnown RBP21.74■■□□□ 1.07
CASC4-204ENST00000557945 AOC1P19801 751 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 CXCR5P32302 372 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 PTPN7P35236 360 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 WASP42768 502 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 STK19P49842 368 aaPredicted RBP21.74■■□□□ 1.07
CASC4-204ENST00000557945 ADCY2Q08462 1091 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 ZNF234Q14588 700 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 RETSATQ6NUM9 610 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 NPNTQ6UXI9 565 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 LEKR1Q6ZMV7 388 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 TRMT11Q7Z4G4 463 aaKnown RBP21.74■■□□□ 1.07
CASC4-204ENST00000557945 ALLCQ8N6M5 410 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 KCNV2Q8TDN2 545 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 WDR24Q96S15 920 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 ACOX2Q99424 681 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 HERPUD2Q9BSE4 406 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 CARD9Q9H257 536 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 CACNA2D2Q9NY47 1150 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 THAP10Q9P2Z0 257 aaPredicted RBP21.74■■□□□ 1.07
CASC4-204ENST00000557945 EFR3BQ9Y2G0 817 aa21.74■■□□□ 1.07
CASC4-204ENST00000557945 ATG2BQ96BY7 2078 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 MUC3AQ02505 3323 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 TJP3O95049 919 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 SRPRAP08240 638 aaKnown RBP21.73■■□□□ 1.07
CASC4-204ENST00000557945 HNRNPLP14866 589 aaKnown RBP eCLIP21.73■■□□□ 1.079e-11■■■■□ 24.8
CASC4-204ENST00000557945 NNMTP40261 264 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 CLCN5P51795 746 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 PTPRNQ16849 979 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 SDE2Q6IQ49 451 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 SERPINA13PQ6UXR4 307 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 BBS12Q6ZW61 710 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 ATPAF2Q8N5M1 289 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 IL17RCQ8NAC3 791 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 HAUS1Q96CS2 278 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 SP110Q9HB58 689 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 DTLQ9NZJ0 730 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 IPO11Q9UI26 975 aaKnown RBP21.73■■□□□ 1.07
CASC4-204ENST00000557945 SLCO3A1Q9UIG8 710 aa21.73■■□□□ 1.07
CASC4-204ENST00000557945 NUP205Q92621 2012 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 ZMPSTE24O75844 475 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 MX2P20592 715 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 TGM2P21980 687 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 NTSR1P30989 418 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 RPS9P46781 194 aaKnown RBP21.72■■□□□ 1.07
CASC4-204ENST00000557945 ARF5P84085 180 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 GALNT2Q10471 571 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 SLC10A2Q12908 348 aaPredicted RBP21.72■■□□□ 1.07
CASC4-204ENST00000557945 PKN3Q6P5Z2 889 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 ARHGAP36Q6ZRI8 547 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 BMP8AQ7Z5Y6 402 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 FBXL6Q8N531 539 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 ATP11CQ8NB49 1132 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 TXNDC5Q8NBS9 432 aaKnown RBP21.72■■□□□ 1.07
CASC4-204ENST00000557945 MRGPRX3Q96LB0 322 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 CHRDQ9H2X0 955 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 SAE1Q9UBE0 346 aaPredicted RBP21.72■■□□□ 1.07
CASC4-204ENST00000557945 STON1Q9Y6Q2 735 aa21.72■■□□□ 1.07
CASC4-204ENST00000557945 ZSCAN5CA6NGD5 496 aaPredicted RBP21.71■■□□□ 1.07
CASC4-204ENST00000557945 WASH3PC4AMC7 463 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 J3KR12 359 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 NPC1O15118 1278 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 CEP104O60308 925 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 ATG13O75143 517 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 MT-CO1P00395 513 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 CHRM1P11229 460 aaPredicted RBP21.71■■□□□ 1.07
CASC4-204ENST00000557945 PECAM1P16284 738 aaPredicted RBP21.71■■□□□ 1.07
CASC4-204ENST00000557945 IL12RB1P42701 662 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 GEMIN4P57678 1058 aaKnown RBP21.71■■□□□ 1.07
CASC4-204ENST00000557945 ACCSLQ4AC99 568 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 HSF5Q4G112 596 aaPredicted RBP21.71■■□□□ 1.07
CASC4-204ENST00000557945 P3H4Q92791 437 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 NAPGQ99747 312 aaPredicted RBP21.71■■□□□ 1.07
CASC4-204ENST00000557945 ACTL7AQ9Y615 435 aa21.71■■□□□ 1.07
CASC4-204ENST00000557945 CTAGE9A4FU28 777 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms