RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 A0A1W2PQF6 199 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 TCRBV5S1A1TA0A578 114 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ILVBLA1L0T0 632 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 TARSL2A2RTX5 802 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 EEF2KO00418 725 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 FGF10O15520 208 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 RAMP2O60895 175 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 CNTN5O94779 1100 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 AVPP01185 164 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 HLA-EP13747 358 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 RHOQP17081 205 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 GABRG2P18507 467 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 PRKCHP24723 683 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 EPHB2P29323 1055 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 L1CAMP32004 1257 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 CYLC1P35663 651 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ARL4AP40617 200 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 P2RY2P41231 377 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 DHPSP49366 369 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF75DP51815 510 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 GALCP54803 685 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 GEMIN4P57678 1058 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 TPI1P60174 286 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 RPL6Q02878 288 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ZBTB16Q05516 673 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 GFPT1Q06210 699 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SLC20A2Q08357 652 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 CCDC15Q0P6D6 951 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SCAPQ12770 1279 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ENPP2Q13822 863 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SPA17Q15506 151 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 BOLA3Q53S33 107 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ZFYVE27Q5T4F4 411 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SYCP2LQ5T4T6 812 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ERMARDQ5T6L9 678 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SH3PXD2AQ5TCZ1 1133 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 TMEM215Q68D42 235 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF776Q68DI1 518 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 KIAA1211LQ6NV74 962 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 VASH1Q7L8A9 365 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ASCL5Q7RTU5 278 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 BNIPLQ7Z465 357 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 TMPRSS6Q8IU80 811 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 PSTKQ8IV42 348 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 APCDD1Q8J025 514 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 CCDC185Q8N715 623 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 DCAF4L2Q8NA75 395 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ATP11CQ8NB49 1132 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF564Q8TBZ8 553 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 MYEOVQ96EZ4 313 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 RPL10LQ96L21 214 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 FEM1AQ9BSK4 669 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 THAP2Q9H0W7 228 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 DHX35Q9H5Z1 703 aaKnown RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 NHEJ1Q9H9Q4 299 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ATP13A1Q9HD20 1204 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 UVRAGQ9P2Y5 699 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 PCSK1NQ9UHG2 260 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 ANAPC7Q9UJX3 599 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 FZD10Q9ULW2 581 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 USP18Q9UMW8 372 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SCML1Q9UN30 329 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 CYP8B1Q9UNU6 501 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 AP4E1Q9UPM8 1137 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 INVSQ9Y283 1065 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 TBC1D30Q9Y2I9 924 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 SNX10Q9Y5X0 201 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 MUC6Q6W4X9 2439 aa8.54□□□□□ -1.04
PSEN1-223ENST00000557511 IGLV3-10A0A075B6K4 115 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 ANTXRLA6NF34 631 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 C1QTNF3-AMACRE9PGA6 284 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 H3BRJ5 948 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 CBX4O00257 560 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 BNIP3LO60238 219 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 LRP3O75074 770 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 LRIG2O94898 1065 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 TMEM253P0C7T8 217 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 MZF1P28698 734 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 HOXC13P31276 330 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 PCK1P35558 622 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 CREB5Q02930 508 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 GNA12Q03113 381 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 CAMK2GQ13555 558 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 POLD3Q15054 466 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 HNRNPA1L2Q32P51 320 aaKnown RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 PLK5Q496M5 336 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 ALFQ53S48 1182 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 PPP6R3Q5H9R7 873 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 SPDYCQ5MJ68 293 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 FAM46CQ5VWP2 391 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 CXorf57Q6NSI4 855 aaKnown RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 CYP2U1Q7Z449 544 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 KBTBD6Q86V97 674 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 CACUL1Q86Y37 369 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 DNAAF5Q86Y56 855 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms