RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TYW5A2RUC4 315 aaKnown RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 TRABD2BA6NFA1 517 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 LRRC72A6NJI9 287 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 H0Y8X5 98 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 TULP2O00295 520 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 O00370 1275 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 ACSL4O60488 711 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 TBL1XO60907 577 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 SRPRAP08240 638 aaKnown RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 CCR5P51681 352 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 C21orf59P57076 290 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 FKBP3Q00688 224 aaKnown RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 PKP1Q13835 747 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 CNGA2Q16280 664 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 HNRNPA1L2Q32P51 320 aaKnown RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 C11orf91Q3C1V1 193 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 C19orf48Q6RUI8 117 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 C8orf86Q6ZUL3 223 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 ADAT2Q7Z6V5 191 aaKnown RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 CCDC117Q8IWD4 279 aaPredicted RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 CACTIN-AS1Q8N1I8 211 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 UBR7Q8N806 425 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 HJURPQ8NCD3 748 aaPredicted RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 MDM1Q8TC05 714 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 PABPC3Q9H361 631 aaKnown RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 FTSJ1Q9UET6 329 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 FZD4Q9ULV1 537 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.98□□□□□ -0.97
VRK1-206ENST00000557222 BTBD3Q9Y2F9 522 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 RAXQ9Y2V3 346 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 ATP6V1DQ9Y5K8 247 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 SETXQ7Z333 2677 aaKnown RBP8.98□□□□□ -0.97
VRK1-206ENST00000557222 BPTFQ12830 3046 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 PTPRQQ9UMZ3 2332 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 COL5A1P20908 1838 aaPredicted RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 SART1O43290 800 aaKnown RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 PRMT3O60678 531 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 FSBPO95073 299 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 ZNF202O95125 648 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 MOCS3O95396 460 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 LTFP02788 710 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 IGHV4-34P06331 123 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 CD19P15391 556 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 EPB42P16452 691 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 CD70P32970 193 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 NUDT1P36639 197 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 RPL34P49207 117 aaKnown RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 GALCP54803 685 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 TBX4P57082 545 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 LRRC63Q05C16 580 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 ILKQ13418 452 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 SLC12A1Q13621 1099 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 CST6Q15828 149 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 CBWD6Q4V339 395 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 FAM133BQ5BKY9 247 aaKnown RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 CBWD3Q5JTY5 395 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 CBWD5Q5RIA9 395 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 C20orf204Q6ZNR8 217 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 CD163Q86VB7 1156 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 MFN1Q8IWA4 741 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 OXR1Q8N573 874 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 OR2T34Q8NGX1 318 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 UBA3Q8TBC4 463 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 NDRG1Q92597 394 aaKnown RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 EDEM1Q92611 657 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 EEF2KMTQ96G04 330 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 SERPINB11Q96P15 392 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 GSDMAQ96QA5 445 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 ELF4Q99607 663 aaPredicted RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 TSG101Q99816 390 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 TRIM62Q9BVG3 475 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 ERVMER34-1Q9H9K5 563 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 METTL14Q9HCE5 456 aaKnown RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 FBXL12Q9NXK8 326 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 ARMCX3Q9UH62 379 aaPredicted RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 TLR6Q9Y2C9 796 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 SLCO1B1Q9Y6L6 691 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 CFAP46Q8IYW2 2715 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 ITIH6Q6UXX5 1313 aa8.97□□□□□ -0.97
VRK1-206ENST00000557222 ARID1BQ8NFD5 2236 aaPredicted RBP8.97□□□□□ -0.97
VRK1-206ENST00000557222 MUC22E2RYF6 1773 aaPredicted RBP8.96□□□□□ -0.97
VRK1-206ENST00000557222 EDDM13A0A1B0GTR0 161 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 ENC1O14682 589 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 P4HA2O15460 535 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 MSI1O43347 362 aaKnown RBP8.96□□□□□ -0.98
VRK1-206ENST00000557222 LCP1P13796 627 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 GOT1P17174 413 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 NFKB1P19838 968 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 HNF1BP35680 557 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 CHRNA4P43681 627 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 ACADSBP45954 432 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 RXRGP48443 463 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 SGSHP51688 502 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 CYP4F3Q08477 520 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 CETN1Q12798 172 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 OVGP1Q12889 678 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 OCLNQ16625 522 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 MEA1Q16626 185 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 SLC45A4Q5BKX6 768 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms