RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 LINC00523Q86TU6 105 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 KCNMB4Q86W47 210 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 TNS4Q8IZW8 715 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 RDH11Q8TC12 318 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 URGCPQ8TCY9 931 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 NDRG1Q92597 394 aaKnown RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 PPP2R3CQ969Q6 453 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 KCNK16Q96T55 309 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 VAT1Q99536 393 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 CCDC28BQ9BUN5 200 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 FAM192AQ9GZU8 254 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 KATNBL1Q9H079 304 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 ILKAPQ9H0C8 392 aaPredicted RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 CDH19Q9H159 772 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 GBA3Q9H227 469 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 CYP4F11Q9HBI6 524 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 C20orf96Q9NUD7 363 aaPredicted RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 RNF19AQ9NV58 838 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 RRN3Q9NYV6 651 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 IL1RAPL1Q9NZN1 696 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 CDH22Q9UJ99 828 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 TLK1Q9UKI8 766 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 PPM1HQ9ULR3 514 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 ANKRD6Q9Y2G4 727 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 TSC2P49815 1807 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 PDHXO00330 501 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CLDN5O00501 218 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 PSMD3O43242 534 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 DCXO43602 365 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TRIM13O60858 407 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 USP12O75317 370 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 F9P00740 461 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 FESP07332 822 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 FAM163BP0C2L3 166 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 UBTFL6P0CB48 400 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 SRGAP2BP0DMP2 458 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 COX4I1P13073 169 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ERCC2P18074 760 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ERFP50548 548 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TUBP50607 506 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 PRKAA2P54646 552 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 MAP3K7CLP57077 242 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 COG7P83436 770 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TBL3Q12788 808 aaKnown RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 SNX17Q15036 470 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ANO4Q32M45 955 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 HSP90AA5PQ58FG0 334 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 RALGPS1Q5JS13 557 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 OTUD1Q5VV17 481 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 SYPL2Q5VXT5 272 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 OR52E8Q6IFG1 317 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 NAPEPLDQ6IQ20 393 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SLC30A9Q6PML9 568 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 EPGNQ6UW88 154 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CLEC20AQ6ZU45 233 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 MAVSQ7Z434 540 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 BNIPLQ7Z465 357 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TMEM135Q86UB9 458 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 LCA5Q86VQ0 697 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 KBTBD2Q8IY47 623 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 DEFB107AQ8IZN7 70 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TDRD5Q8NAT2 981 aaKnown RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 NETO2Q8NC67 525 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 PYDC1Q8WXC3 89 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 GATA6Q92908 595 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CCDC124Q96CT7 223 aaKnown RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 FCRL3Q96P31 734 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 SERPINI1Q99574 410 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 RTKNQ9BST9 563 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 KLHL4Q9C0H6 718 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 COG4Q9H9E3 785 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 NMRAL1Q9HBL8 299 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 GOLGA2P5Q9HBQ8 144 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CASS4Q9NQ75 786 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TCF7L2Q9NQB0 619 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TMPRSS4Q9NRS4 437 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 DDIT4Q9NX09 232 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 BCAP29Q9UHQ4 241 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CCL15-CCL14A0A0B4J2E2 113 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 ENO4A6NNW6 628 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 RNF223E7ERA6 249 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 E9PBE3 544 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ZBTB24O43167 697 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 ATP9BO43861 1147 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 KLHL41O60662 606 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 AP1G2O75843 785 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 PDE5AO76074 875 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 PRKCGP05129 697 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 LYNP07948 512 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 THRAP10827 490 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 NCAM1P13591 858 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ITGAXP20702 1163 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CYP2B6P20813 491 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 NDUFV1P49821 464 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 PITX1P78337 314 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 BTKQ06187 659 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CDH17Q12864 832 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CDC16Q13042 620 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 USP4Q13107 963 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms