RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PIWIL2Q8TC59 973 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RXFP2Q8WXD0 754 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FAM131CQ96AQ9 280 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ASB9Q96DX5 294 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 IMP4Q96G21 291 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 C8orf48Q96LL4 319 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF184Q99676 751 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CCT7Q99832 543 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MRPL45Q9BRJ2 306 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM121Q9BTD3 319 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TRMOQ9BU70 441 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TSSK1BQ9BXA7 367 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SPATA16Q9BXB7 569 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZCWPW1Q9H0M4 648 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 GSTO2Q9H4Y5 243 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ELAC1Q9H777 363 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PALMDQ9NP74 551 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SAYSD1Q9NPB0 183 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SLCO1B3Q9NPD5 702 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 XPNPEP3Q9NQH7 507 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 VPS45Q9NRW7 570 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CLIC5Q9NZA1 410 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PTTG2Q9NZH5 202 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 NXF1Q9UBU9 619 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 NDOR1Q9UHB4 597 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ADAMTS6Q9UKP5 1117 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 APOBEC2Q9Y235 224 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RAP2CQ9Y3L5 183 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF330Q9Y3S2 320 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 EXOC1LA0A1B0GW35 172 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FXYD1O00168 92 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 EIF3FO00303 357 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MPHOSPH10O00566 681 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FBP2O00757 339 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 HNRNPDLO14979 420 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MCF2LO15068 1137 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FGF10O15520 208 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SEC14L5O43304 696 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MAP3K7O43318 606 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 DNAJA2O60884 412 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 NDUFS2O75306 463 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 OAZ2O95190 189 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 IFI6P09912 130 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 IDO1P14902 403 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PFKLP17858 780 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 EIF2AK2P19525 551 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 OSBPP22059 807 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RPS3P23396 243 aaKnown RBP eCLIP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CYP2F1P24903 491 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RDXP35241 583 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 GGT5P36269 586 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ETV6P41212 452 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ITGA1P56199 1179 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SNX16P57768 344 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 EIF3EP60228 445 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 GPS1Q13098 491 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RCN2Q14257 317 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF699Q32M78 642 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 GTF2IRD2BQ6EKJ0 949 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PPP4R4Q6NUP7 873 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM270Q6UE05 265 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CAMKMTQ7Z624 323 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 GTF2IRD2Q86UP8 949 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF567Q8N184 647 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 METTL25Q8N6Q8 603 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 DTNBP1Q96EV8 351 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MAML3Q96JK9 1138 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RDH12Q96NR8 316 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PSMB7Q99436 277 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 C11orf70Q9BRQ4 267 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 OSBPL10Q9BXB5 764 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 NT5C1AQ9BXI3 368 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 B3GNT5Q9BYG0 378 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 NMUR2Q9GZQ4 415 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 WWP1Q9H0M0 922 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RNPEPQ9H4A4 650 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 VEZTQ9HBM0 779 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM39Q9HCM9 518 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 DMAP1Q9NPF5 467 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF277Q9NRM2 450 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 HEBP1Q9NRV9 189 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 DPP3Q9NY33 737 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CDH22Q9UJ99 828 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TSPAN16Q9UKR8 245 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PSMD13Q9UNM6 376 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM33Q9UPN9 1127 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CEPT1Q9Y6K0 416 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 IFRD1O00458 451 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SDHDO14521 159 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SLC22A1O15245 554 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 B4GALT5O43286 388 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SPOPO43791 374 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CST8O60676 142 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PIGNO95427 931 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TSPAN12O95859 305 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 APBA3O96018 575 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TFAP2AP05549 437 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ABCB1P08183 1280 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ITGA2BP08514 1039 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms