RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 GABRB3P28472 473 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 HOXC12P31275 282 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ALDH1A3P47895 512 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 RPL10AP62906 217 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 RNF4P78317 190 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TXNL4AP83876 142 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 BNC1Q01954 994 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 BTKQ06187 659 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 PUM3Q15397 648 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 RTN1Q16799 776 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TEX30Q5JUR7 227 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 EFHC1Q5JVL4 640 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 SLC16A12Q6ZSM3 486 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 KRT74Q7RTS7 529 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 LYSMD3Q7Z3D4 306 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 P3H2Q8IVL5 708 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 EID3Q8N140 333 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 LEMD2Q8NC56 503 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 PPHLN1Q8NEY8 458 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 FIG4Q92562 907 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 UFD1Q92890 307 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ALKBH8Q96BT7 664 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ZDHHC12Q96GR4 267 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 HES6Q96HZ4 224 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 NTPCRQ9BSD7 190 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 EFHD1Q9BUP0 239 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TEX13BQ9BXU2 312 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 FRMD8Q9BZ67 464 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 LRRC4CQ9HCJ2 640 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 CNNM1Q9NRU3 951 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ZDHHC18Q9NUE0 388 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 B3GNT2Q9NY97 397 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 SMARCAL1Q9NZC9 954 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 LGALS13Q9UHV8 139 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ZNF221Q9UK13 617 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 GDAQ9Y2T3 454 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 CHTOPQ9Y3Y2 248 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 PTCH2Q9Y6C5 1203 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 KCNE2Q9Y6J6 123 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 STRCP1A6NGW2 1772 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 PQLC2LA1A4F0 135 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 H3BMM5 538 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 CACNB4O00305 520 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 CTDSP2O14595 271 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 NDUFS6O75380 124 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 IDH1O75874 414 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 RBBP9O75884 186 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 CAMTA2O94983 1202 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 GLAP06280 429 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TRAPPC2P0DI81 140 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TRAPPC2BP0DI82 140 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ZNF16P17020 682 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 GNPDA1P46926 289 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 MGAT3Q09327 533 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 COTL1Q14019 142 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 INAVAQ3KP66 663 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 UBAP2Q5T6F2 1119 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 MEI1Q5TIA1 1274 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 GADL1Q6ZQY3 521 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 FAM196AQ6ZSG2 479 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 SH3RF1Q7Z6J0 888 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ARMC8Q8IUR7 673 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 CHERPQ8IWX8 916 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 KLHL7Q8IXQ5 586 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 DPP10Q8N608 796 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ZNF540Q8NDQ6 660 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 PIK3C3Q8NEB9 887 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TESCQ96BS2 214 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 DCUN1D1Q96GG9 259 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 FEM1CQ96JP0 617 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 C12orf57Q99622 126 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 PYM1Q9BRP8 204 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TMEM246Q9BRR3 403 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 TRAF4Q9BUZ4 470 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 BRIP1Q9BX63 1249 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 RNF26Q9BY78 433 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 SLC19A3Q9BZV2 496 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 SMYD3Q9H7B4 428 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ZNF556Q9HAH1 456 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 AKIP1Q9NQ31 210 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 POLR3BQ9NW08 1133 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 VPS54Q9P1Q0 977 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 NYAP2Q9P242 653 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 LRWD1Q9UFC0 647 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 EBF1Q9UH73 591 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 SLC24A2Q9UI40 661 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 CNOT6Q9ULM6 557 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 ERVK-19Q9WJR5 959 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 IPPQ9Y573 584 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 AP4B1Q9Y6B7 739 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 PIAS3Q9Y6X2 628 aa8.73□□□□□ -1.01
HNRNPC-211ENST00000554455 DISP2A7MBM2 1401 aa8.72□□□□□ -1.01
HNRNPC-211ENST00000554455 A0A0X1KG70 313 aa8.72□□□□□ -1.01
HNRNPC-211ENST00000554455 PMS2P1A4D2B8 440 aa8.72□□□□□ -1.01
HNRNPC-211ENST00000554455 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms