RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 PABPC3Q9H361 631 aaKnown RBP7.73□□□□□ -1.17
LINC00640-201ENST00000554409 MTG2Q9H4K7 406 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 HAUS4Q9H6D7 363 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 SGK2Q9HBY8 427 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 CAPN10Q9HC96 672 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 SEPT11Q9NVA2 429 aaKnown RBP7.73□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF212Q9UDV6 495 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 SLCO3A1Q9UIG8 710 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 SLC25A13Q9UJS0 675 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 VPS28Q9UK41 221 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 HS3ST2Q9Y278 367 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 SNX10Q9Y5X0 201 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 ADAMTS9Q9P2N4 1935 aa7.73□□□□□ -1.17
LINC00640-201ENST00000554409 PI4KAP42356 2102 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 CACNA1AO00555 2505 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ILVBLA1L0T0 632 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ANKRD62A6NC57 917 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 MEI4A8MW99 385 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 C10orf142B7Z368 130 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 GOLGA6L19H0YKK7 550 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 CDX4O14627 284 aaPredicted RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ALOX15BO15296 676 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 CCP110O43303 1012 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 RNASEH1O60930 286 aaKnown RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 GJB6O95452 261 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ADH1BP00325 375 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 RHOCP08134 193 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 TNFAIP3P21580 790 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 OR1E1P30953 314 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ACSL1P33121 698 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF143P52747 638 aaPredicted RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 UBASH3AP57075 661 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 SFSWAPQ12872 951 aaKnown RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ELAVL3Q14576 367 aaKnown RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 CST6Q15828 149 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 RAB6CQ53S08 254 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 C6orf118Q5T5N4 469 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 SH3PXD2AQ5TCZ1 1133 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 DCAF12L1Q5VU92 463 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 IL31Q6EBC2 164 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 PLEKHA7Q6IQ23 1121 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF571Q7Z3V5 609 aaPredicted RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 PHLDB2Q86SQ0 1253 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 CACUL1Q86Y37 369 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 SH2D3CQ8N5H7 860 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 SYN2Q92777 582 aaPredicted RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 FAM131CQ96AQ9 280 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 MCEEQ96PE7 176 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 CNPY3Q9BT09 278 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 C2orf49Q9BVC5 232 aaPredicted RBP7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ZYG11BQ9C0D3 744 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 BTBD1Q9H0C5 482 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 RAB6CQ9H0N0 254 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 MUC3BQ9H195 1237 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 OSGEPQ9NPF4 335 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 TMEM9BQ9NQ34 198 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 TAS2R14Q9NYV8 317 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 MPP6Q9NZW5 540 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 OR12D3Q9UGF7 316 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 ADAMTS1Q9UHI8 967 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 FZD4Q9ULV1 537 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 SLC6A14Q9UN76 642 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 NEU3Q9UQ49 428 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 NCKAP1Q9Y2A7 1128 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 SDK1Q7Z5N4 2213 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 PLXNA2O75051 1894 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 FRYLO94915 3013 aa7.72□□□□□ -1.17
LINC00640-201ENST00000554409 TP53BP1Q12888 1972 aaPredicted RBP7.71□□□□□ -1.17
LINC00640-201ENST00000554409 A0A1B0GTW7 788 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 DCDC2BA2VCK2 349 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 C4orf47A7E2U8 309 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 DDX3XO00571 662 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00640-201ENST00000554409 MCF2LO15068 1137 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 MID1O15344 667 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 SRGAP2O75044 1071 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 RTN2O75298 545 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 ZMPSTE24O75844 475 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 LRIG2O94898 1065 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 SEMA4FO95754 770 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 CFIP05156 583 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 MYBL1P10243 752 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 SRCP12931 536 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 GNSP15586 552 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 RHOQP17081 205 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 DESP17661 470 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 ENGP17813 658 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 C5AR1P21730 350 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 RRM1P23921 792 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 L1CAMP32004 1257 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 ETFBP38117 255 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 MAPKAPK2P49137 400 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 RPL7AP62424 266 aaKnown RBP7.71□□□□□ -1.18
LINC00640-201ENST00000554409 ZBED6P86452 979 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 GNA12Q03113 381 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 GFPT1Q06210 699 aaPredicted RBP7.71□□□□□ -1.18
LINC00640-201ENST00000554409 KLHL30Q0D2K2 578 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 MAMLD1Q13495 774 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 DLG2Q15700 870 aa7.71□□□□□ -1.18
LINC00640-201ENST00000554409 DAB2IPQ5VWQ8 1189 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms