RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 CNTN6Q9UQ52 1028 aa22.26■■□□□ 1.15
SMARCD1-212ENST00000551966 A0A1B0GVM2 712 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 TCAF2A6NFQ2 919 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 E5RJQ4 531 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 RNF103O00237 685 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 OPA1O60313 960 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 CKMT1AP12532 417 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 PRLRP16471 622 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 PIP5KL1Q5T9C9 394 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 EHBP1Q8NDI1 1231 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 ZNF578Q96N58 590 aaPredicted RBP22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 GSDMAQ96QA5 445 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 GDPD2Q9HCC8 539 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 CPNE5Q9HCH3 593 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 PREBQ9HCU5 417 aa22.25■■□□□ 1.15
SMARCD1-212ENST00000551966 CFAP46Q8IYW2 2715 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 LY6G6EA0A0G2JKS1 128 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 ERVH48-1M5A8F1 160 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 ALOX15BO15296 676 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 FFAR2O15552 330 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 PIAS2O75928 621 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 CTSLP07711 333 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 ZNF18P17022 549 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 GCNT1Q02742 428 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 CENPCQ03188 943 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 SH2D3CQ8N5H7 860 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 SPATA20Q8TB22 786 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 NOX5Q96PH1 765 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 SCAND2PQ9GZW5 306 aaPredicted RBP22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 THAP9Q9H5L6 903 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 SLC12A6Q9UHW9 1150 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 SLC25A13Q9UJS0 675 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 U3KQA8 63 aa22.24■■□□□ 1.15
SMARCD1-212ENST00000551966 A0A1W2PQU0 124 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 C1QTNF3-AMACRE9PGA6 284 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 MT-CO1P00395 513 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 OXCT1P55809 520 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 PCBP4P57723 403 aaKnown RBP22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 ZNF284Q2VY69 593 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 RABGAP1LQ5R372 815 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 FMR1NBQ8N0W7 255 aaPredicted RBP22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 OR13H1Q8NG92 308 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 ZNF606Q8WXB4 792 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 APOLD1Q96LR9 279 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 TRIM62Q9BVG3 475 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 FZD3Q9NPG1 666 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 ACP6Q9NPH0 428 aa22.23■■□□□ 1.15
SMARCD1-212ENST00000551966 SYNJ2BP-COX16A0A087WUM0 186 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 P4HA2O15460 535 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 BNIP3LO60238 219 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 USP12O75317 370 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 DXOO77932 396 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 CD44P16070 742 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 CLDN2P57739 230 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 GABREP78334 506 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 AUHQ13825 339 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 ARHGAP40Q5TG30 622 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 TTC39BQ5VTQ0 682 aaPredicted RBP22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 C14orf80Q86SX3 495 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 DEFB106AQ8N104 65 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 ARRDC3Q96B67 414 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 CEP63Q96MT8 703 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 RPRD1AQ96P16 312 aaPredicted RBP22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 MED15Q96RN5 788 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 SEMA4CQ9C0C4 833 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 OSBPL2Q9H1P3 480 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 COX16Q9P0S2 106 aa22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 ZFR2Q9UPR6 939 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 TDRD6O60522 2096 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-212ENST00000551966 ZNF462Q96JM2 2506 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 CYSRT1A8MQ03 144 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 J3QKU1 62 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 SRCP12931 536 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 LSSP48449 732 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 CCDC40Q4G0X9 1142 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 TAF1BQ53T94 588 aaPredicted RBP22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 ZNF542PQ5EBM4 170 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 ISM2Q6H9L7 571 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 NEK5Q6P3R8 708 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 HORMAD1Q86X24 394 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 LSMEM2Q8N112 164 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 SLC22A18ASQ8N1D0 253 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 WDTC1Q8N5D0 677 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 WBP1Q96G27 269 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 PPP1R9BQ96SB3 815 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 CALN1Q9BXU9 219 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 ASCL3Q9NQ33 180 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 VANGL2Q9ULK5 521 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 TBC1D30Q9Y2I9 924 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 ATMQ13315 3056 aa22.21■■□□□ 1.15
SMARCD1-212ENST00000551966 TENM4Q6N022 2769 aa22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 K7ERQ8 282 aa22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 CSO75390 466 aaKnown RBP22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 LETM1O95202 739 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 SLC2A3P11169 496 aa22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 KRT5P13647 590 aa22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 CCR1P32246 355 aa22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 CHRNA3P32297 505 aa22.2■■□□□ 1.14
SMARCD1-212ENST00000551966 GGCXP38435 758 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms