RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 HNMTP50135 292 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 IKBIPQ70UQ0 350 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 HIST3H2AQ7L7L0 130 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TATDN2Q93075 761 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 HIST1H2ACQ93077 130 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 UBE2E3Q969T4 207 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TKTL2Q9H0I9 626 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 MAPRE3Q9UPY8 281 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 MANSC4A6NHS7 340 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TSPAN3O60637 253 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ZNF605Q86T29 641 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 RNASE11Q8TAA1 199 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ZDHHC6Q9H6R6 413 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ZNF232Q9UNY5 417 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ATP6V1G2O95670 118 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ITGAXP20702 1163 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 GSSP48637 474 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ALDH5A1P51649 535 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 XRCC4Q13426 336 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 SPIDRQ14159 915 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 CRY1Q16526 586 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ALG11Q2TAA5 492 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 MAML3Q96JK9 1138 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 MTFR1LQ9H019 292 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 VAV3Q9UKW4 847 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 MYRFQ9Y2G1 1151 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 C15orf38-AP3S2A0A0A6YYH1 394 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TRAV19A0A0A6YYK7 116 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 MAGEC1O60732 1142 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 NTSP30990 170 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 FBXL19Q6PCT2 694 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 KATNAL2Q8IYT4 538 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 DCCP43146 1447 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 MARCH2Q9P0N8 246 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 APOC4-APOC2K7ER74 178 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 KPNA5O15131 536 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 PDE9AO76083 593 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 VAPBO95292 243 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 APOC2P02655 101 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 UMPSP11172 480 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 RPL21P46778 160 aaKnown RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 CLK2P49760 499 aaKnown RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 CNGA2Q16280 664 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 FAM187BQ17R55 369 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 SLC45A4Q5BKX6 768 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 MFSD7Q6UXD7 560 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TRAPPC5Q8IUR0 188 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 OMDQ99983 421 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TPP1O14773 563 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TSPAN19P0C672 248 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 DGKAP23743 735 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 MSLNQ13421 630 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 WASHC2DQ5SRD0 308 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 DENND6AQ8IWF6 608 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 NFASCO94856 1347 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 AKR1A1P14550 325 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 PFKFB4Q16877 469 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TMEM119Q4V9L6 283 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 SNX30Q5VWJ9 437 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 EXOC3L1Q86VI1 746 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 KIAA1683Q9H0B3 1180 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 KCNQ5Q9NR82 932 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 SAE1Q9UBE0 346 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 FAM205AQ6ZU69 1335 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 HOXB8P17481 243 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TOMM20Q15388 145 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ULK2Q8IYT8 1036 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 LRRC39Q96DD0 335 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 QRFPRQ96P65 431 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TMEM216Q9P0N5 145 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 NDOR1Q9UHB4 597 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ETS1P14921 441 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TPH1P17752 444 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 SPDYCQ5MJ68 293 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 DOK6Q6PKX4 331 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 KCNT2Q6UVM3 1135 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 C2orf49Q9BVC5 232 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 AKAP7Q9P0M2 348 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-212ENST00000550536 ACKR2O00590 384 aa12.68□□□□□ -0.38
RAB3IP-212ENST00000550536 ECDO95905 644 aaPredicted RBP12.68□□□□□ -0.38
RAB3IP-212ENST00000550536 RBM43Q6ZSC3 357 aaKnown RBP12.68□□□□□ -0.38
RAB3IP-212ENST00000550536 REEP1Q9H902 201 aa12.68□□□□□ -0.38
RAB3IP-212ENST00000550536 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
RAB3IP-212ENST00000550536 ATAD3AQ9NVI7 634 aa12.68□□□□□ -0.38
RAB3IP-212ENST00000550536 PIH1D1Q9NWS0 290 aaKnown RBP12.68□□□□□ -0.38
RAB3IP-212ENST00000550536 FAM86B1E9PN63 330 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms