RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 TIFAQ96CG3 184 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 CELF6Q96J87 481 aaKnown RBP12.85□□□□□ -0.35
CACNB3-217ENST00000550483 C9orf72Q96LT7 481 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 FCRL5Q96RD9 977 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-217ENST00000550483 C17orf80Q9BSJ5 609 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 SP110Q9HB58 689 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 MPP6Q9NZW5 540 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF638Q14966 1978 aaKnown RBP12.85□□□□□ -0.35
CACNB3-217ENST00000550483 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 ILVBLA1L0T0 632 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 KCNK1O00180 336 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 PAPLNO95428 1278 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 PAPOLAP51003 745 aaKnown RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 KCNQ1P51787 676 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 GABPB1Q06547 395 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 GPM6BQ13491 265 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 POLD3Q15054 466 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 MPP7Q5T2T1 576 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 EMC10Q5UCC4 262 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 NADSYN1Q6IA69 706 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 CYS1Q717R9 158 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 DENND1CQ8IV53 801 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 HJURPQ8NCD3 748 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 FBXO36Q8NEA4 188 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 IGSF8Q969P0 613 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 ATXN3LQ9H3M9 355 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 VPS37BQ9H9H4 285 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF334Q9HCZ1 680 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 VPS45Q9NRW7 570 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 VPS18Q9P253 973 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 AGO1Q9UL18 857 aaKnown RBP12.84□□□□□ -0.35
CACNB3-217ENST00000550483 ARHGAP26Q9UNA1 814 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 TEX264Q9Y6I9 313 aa12.84□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 EXOC1LA0A1B0GW35 172 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 TCRBV7S3A2A0A539 114 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 MAGEB16A2A368 324 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 C2orf78A6NCI8 922 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 SDR42E2A6NKP2 422 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 GOLGA8MH3BSY2 632 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 ZBTB24O43167 697 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CLASP2O75122 1294 aaKnown RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CPP00450 1065 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 JCHAINP01591 159 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CKMP06732 381 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CA3P07451 260 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 TCF3P15923 654 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CES1P23141 567 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 PSMB4P28070 264 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 ZNF177Q13360 481 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 NAB1Q13506 487 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 SERINC3Q13530 473 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 ALFQ53S48 1182 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 FNBP1LQ5T0N5 605 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 MARC1Q5VT66 337 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 Q6ZNB5 142 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 HTR3DQ70Z44 454 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CAND1Q86VP6 1230 aaKnown RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 TEX26Q8N6G2 289 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 SLC22A17Q8WUG5 538 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CYTH2Q99418 400 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 EBNA1BP2Q99848 306 aaKnown RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 RNF38Q9H0F5 515 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 TASP1Q9H6P5 420 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 ACSS3Q9H6R3 686 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.36
CACNB3-217ENST00000550483 GLOD4Q9HC38 313 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 LRRC4CQ9HCJ2 640 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 BFARQ9NZS9 450 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 SENP1Q9P0U3 644 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 LGALS13Q9UHV8 139 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 SH3BP1Q9Y3L3 701 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 ACTL7BQ9Y614 415 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 CPQQ9Y646 472 aa12.83□□□□□ -0.36
CACNB3-217ENST00000550483 PLXNA4Q9HCM2 1894 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 TRANK1O15050 2925 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 E2F8A0AVK6 867 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 GRM6O15303 877 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 PRAMEF11O60813 436 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 CNTN5O94779 1100 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 IGFBP4P22692 258 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 DNAJB1P25685 340 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 ELK3P41970 407 aa12.82□□□□□ -0.36
CACNB3-217ENST00000550483 NPY2RP49146 381 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms