RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CNOT8Q9UFF9 292 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 SUSD2Q9UGT4 822 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 NEU3Q9UQ49 428 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 SPTBN2O15020 2390 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 SNAP91O60641 907 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 LRIG2O94898 1065 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 VAV1P15498 845 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 RHOQP17081 205 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 PSMA2P25787 234 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 ETFBP38117 255 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 MAPKAPK2P49137 400 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 OGDHQ02218 1023 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 TRIM14Q14142 442 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 DUOXA1Q1HG43 343 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 ACCSLQ4AC99 568 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 DGLUCYQ7Z3D6 616 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 MMAAQ8IVH4 418 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 RGL4Q8IZJ4 473 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 STK40Q8N2I9 435 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 RNF214Q8ND24 703 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 OR7D4Q8NG98 312 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 GANCQ8TET4 914 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 PTPRN2Q92932 1015 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 NUSAP1Q9BXS6 441 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 BTBD1Q9H0C5 482 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 PLXNA2O75051 1894 aa17.66■□□□□ 0.42
CHMP1A-208ENST00000550102 A0A0D9SEW6 157 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 FAM72CH0Y354 149 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 MID1O15344 667 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 SEMA4FO95754 770 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 L1CAMP32004 1257 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 ACSL1P33121 698 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 CLCN6P51797 869 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 GNA12Q03113 381 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 DLG2Q15700 870 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 STPG1Q5TH74 334 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 FAM72AQ5TYM5 149 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 SPECC1LQ69YQ0 1117 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 IL31Q6EBC2 164 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 FAM72DQ6L9T8 149 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 SLC23A3Q6PIS1 610 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 Q6ZVU0 165 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 FAM72BQ86X60 149 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 DNAAF5Q86Y56 855 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 ATP11CQ8NB49 1132 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 FNIP1Q8TF40 1166 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 OR8D1Q8WZ84 308 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 CCDC114Q96M63 670 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 EPAS1Q99814 870 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 ISCUQ9H1K1 167 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 SGK2Q9HBY8 427 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 ATP13A1Q9HD20 1204 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 MRPL47Q9HD33 250 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 TMEM248Q9NWD8 314 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 FBXL12Q9NXK8 326 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 ADAMTS1Q9UHI8 967 aa17.65■□□□□ 0.42
CHMP1A-208ENST00000550102 TMEM191CA6NGB0 347 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 CBX4O00257 560 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 ALOX15BO15296 676 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 IL1BP01584 269 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 SERPINF2P08697 491 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 SRCP12931 536 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 GNSP15586 552 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 CASP14P31944 242 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 IRX4P78413 519 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 ZNF252P-AS1Q0IIN9 211 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 DCAF12L1Q5VU92 463 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 NLRP14Q86W24 1093 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 DNASE2BQ8WZ79 361 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 SNX19Q92543 992 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 FAM129BQ96TA1 746 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 OMDQ99983 421 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 SPON2Q9BUD6 331 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 TMEM9BQ9NQ34 198 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 MYO1AQ9UBC5 1043 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 FZD4Q9ULV1 537 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 FZD10Q9ULW2 581 aa17.64■□□□□ 0.41
CHMP1A-208ENST00000550102 ASCC3Q8N3C0 2202 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 A0A1W2PP55 124 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 METTL12A8MUP2 240 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 RNASEH2AO75792 299 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 RNF8O76064 485 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 MT-CO1P00395 513 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 TPM1P09493 284 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 C5AR1P21730 350 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 EPHB2P29323 1055 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 SLC8A1P32418 973 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 GFPT1Q06210 699 aaPredicted RBP17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 RETSATQ6NUM9 610 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 C22orf39Q6P5X5 142 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 LINGO4Q6UY18 593 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 PYROXD2Q8N2H3 581 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 TRIM7Q9C029 511 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 C6orf106Q9H6K1 298 aaPredicted RBP17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 CAPN10Q9HC96 672 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 SERGEFQ9UGK8 458 aa17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 SLC6A14Q9UN76 642 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms