RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 OSBPL2Q9H1P3 480 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 PABPC3Q9H361 631 aaKnown RBP16.17■□□□□ 0.18
DDX54-205ENST00000548786 C6orf106Q9H6K1 298 aaPredicted RBP16.17■□□□□ 0.18
DDX54-205ENST00000548786 FBRSQ9HAH7 460 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 ATP13A1Q9HD20 1204 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 FBXL12Q9NXK8 326 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 PPARGC1AQ9UBK2 798 aaKnown RBP16.17■□□□□ 0.18
DDX54-205ENST00000548786 ZNF212Q9UDV6 495 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 PCSK1NQ9UHG2 260 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 FZD10Q9ULW2 581 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 NEU3Q9UQ49 428 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.17■□□□□ 0.181e-7■■■■□ 23
DDX54-205ENST00000548786 ACTL7AQ9Y615 435 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 A0A087X0T9 212 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 TARSL2A2RTX5 802 aaKnown RBP16.16■□□□□ 0.18
DDX54-205ENST00000548786 DCDC2BA2VCK2 349 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 SMAD6O43541 496 aaKnown RBP16.16■□□□□ 0.18
DDX54-205ENST00000548786 FAM228BP0C875 321 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 SRCP12931 536 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 MAPK8P45983 427 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 GNA12Q03113 381 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 SPDYCQ5MJ68 293 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 DCAF12L1Q5VU92 463 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 SPECC1LQ69YQ0 1117 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 IL31Q6EBC2 164 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 ZNF354CQ86Y25 554 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 SH2D3CQ8N5H7 860 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 DCAF4L2Q8NA75 395 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 NETO1Q8TDF5 533 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 IQCDQ96DY2 449 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 ZNF419Q96HQ0 510 aaPredicted RBP16.16■□□□□ 0.18
DDX54-205ENST00000548786 OMDQ99983 421 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 THAP2Q9H0W7 228 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 TNKS2Q9H2K2 1166 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 ARHGAP20Q9P2F6 1191 aa16.16■□□□□ 0.18
DDX54-205ENST00000548786 BZW2Q9Y6E2 419 aaKnown RBP16.16■□□□□ 0.18
DDX54-205ENST00000548786 ILVBLA1L0T0 632 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 TMEM191CA6NGB0 347 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 ATP9BO43861 1147 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 FSBPO95073 299 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 SEMA4FO95754 770 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 IGLV3-19P01714 112 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 RHOQP17081 205 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 EPHB2P29323 1055 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 SLC8A1P32418 973 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 EIF4A3P38919 411 aaKnown RBP16.15■□□□□ 0.18
DDX54-205ENST00000548786 NRG1Q02297 640 aaPredicted RBP16.15■□□□□ 0.18
DDX54-205ENST00000548786 ZBTB16Q05516 673 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 SCAPQ12770 1279 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 ELAVL3Q14576 367 aaKnown RBP16.15■□□□□ 0.18
DDX54-205ENST00000548786 PUM1Q14671 1186 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX54-205ENST00000548786 ARID5BQ14865 1188 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 CA9Q16790 459 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 SYCP2LQ5T4T6 812 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 STPG1Q5TH74 334 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 DGLUCYQ7Z3D6 616 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 NLRP14Q86W24 1093 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 HDDC3Q8N4P3 179 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 ZCCHC9Q8N567 271 aaKnown RBP16.15■□□□□ 0.18
DDX54-205ENST00000548786 AADATQ8N5Z0 425 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 ARFGAP1Q8N6T3 406 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 OR8D1Q8WZ84 308 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 FOXJ1Q92949 421 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 TRIM11Q96F44 468 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 BTBD6Q96KE9 485 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 PEBP4Q96S96 227 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 GTPBP2Q9BX10 602 aaKnown RBP16.15■□□□□ 0.18
DDX54-205ENST00000548786 BTBD1Q9H0C5 482 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 ISCUQ9H1K1 167 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 DLL3Q9NYJ7 618 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 AP4E1Q9UPM8 1137 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 NCKAP1Q9Y2A7 1128 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 SCINQ9Y6U3 715 aa16.15■□□□□ 0.18
DDX54-205ENST00000548786 C4orf47A7E2U8 309 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 FOXD2O60548 495 aaPredicted RBP16.14■□□□□ 0.17
DDX54-205ENST00000548786 MYBL1P10243 752 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 DNA2P51530 1060 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 ADKP55263 362 aaKnown RBP16.14■□□□□ 0.17
DDX54-205ENST00000548786 GFPT1Q06210 699 aaPredicted RBP16.14■□□□□ 0.17
DDX54-205ENST00000548786 WDR45BQ5MNZ6 344 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 CCDC122Q5T0U0 273 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 VSTM4Q8IW00 320 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 OR2I1PQ8NGU4 316 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 GRIN3AQ8TCU5 1115 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 ARHGEF26Q96DR7 871 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 EPAS1Q99814 870 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 NUSAP1Q9BXS6 441 aaKnown RBP16.14■□□□□ 0.17
DDX54-205ENST00000548786 NEUROG2Q9H2A3 272 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 DHX35Q9H5Z1 703 aaKnown RBP16.14■□□□□ 0.17
DDX54-205ENST00000548786 TMEM248Q9NWD8 314 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 EIF2B4Q9UI10 523 aaKnown RBP16.14■□□□□ 0.17
DDX54-205ENST00000548786 SARDHQ9UL12 918 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 HS3ST2Q9Y278 367 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 FCF1Q9Y324 198 aaKnown RBP16.14■□□□□ 0.17
DDX54-205ENST00000548786 SLCO1B1Q9Y6L6 691 aa16.14■□□□□ 0.17
DDX54-205ENST00000548786 ADAMTS9Q9P2N4 1935 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 METTL12A8MUP2 240 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 SLC30A4O14863 429 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 RAMP2O60895 175 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 RNF8O76064 485 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms