RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 DCBLD1Q8N8Z6 715 aa12.91□□□□□ -0.34
COPS7A-221ENST00000546229 NT5C3BQ969T7 300 aa12.91□□□□□ -0.34
COPS7A-221ENST00000546229 FAM204AQ9H8W3 233 aa12.91□□□□□ -0.34
COPS7A-221ENST00000546229 UBE2TQ9NPD8 197 aaPredicted RBP12.91□□□□□ -0.34
COPS7A-221ENST00000546229 DDIT4Q9NX09 232 aa12.91□□□□□ -0.34
COPS7A-221ENST00000546229 DMTF1Q9Y222 760 aa12.91□□□□□ -0.34
COPS7A-221ENST00000546229 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.91□□□□□ -0.34
COPS7A-221ENST00000546229 U3KQA8 63 aa12.91□□□□□ -0.34
COPS7A-221ENST00000546229 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 CAPN9O14815 690 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 MED7O43513 233 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 HSF2BPO75031 334 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 PAGE1O75459 146 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ZNF821O75541 412 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-221ENST00000546229 CNTN5O94779 1100 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 GNA14O95837 355 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 MT-CO1P00395 513 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 CDK4P11802 303 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 SLC9A1P19634 815 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 MAT2AP31153 395 aaKnown RBP12.9□□□□□ -0.34
COPS7A-221ENST00000546229 CCR1P32246 355 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 NUDT1P36639 197 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ARRB1P49407 418 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-221ENST00000546229 CETN1Q12798 172 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 OVGP1Q12889 678 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ILKQ13418 452 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 DLG2Q15700 870 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 POM121L1PQ3SYA9 428 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ALFQ53S48 1182 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 RABGAP1LQ5R372 815 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 RNF219Q5W0B1 726 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-221ENST00000546229 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 PCSK4Q6UW60 755 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ENOSF1Q7L5Y1 443 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 PASD1Q8IV76 773 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 SLC22A18ASQ8N1D0 253 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 C1orf131Q8NDD1 294 aaKnown RBP12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ZNF397Q8NF99 534 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-221ENST00000546229 OR2A12Q8NGT7 310 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 PIP4K2CQ8TBX8 421 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 OR8D1Q8WZ84 308 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ARRDC3Q96B67 414 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 NRSN2Q9GZP1 204 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 PREBQ9HCU5 417 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 PIGVQ9NUD9 493 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 ARHGEF38Q9NXL2 777 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 APEX2Q9UBZ4 518 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
COPS7A-221ENST00000546229 IGLV3-10A0A075B6K4 115 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3DA0A087WVF3 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3IA0A087WXS9 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3EA0A087X179 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3KA0A087X1G2 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3FA6NER0 549 aaPredicted RBP12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3LB9A6J9 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 K7ERQ8 282 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 BIN1O00499 593 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 SNAP91O60641 907 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 GADD45BO75293 160 aaPredicted RBP12.89□□□□□ -0.35
COPS7A-221ENST00000546229 GRAP2O75791 330 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3HP0C7X1 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 SLC2A3P11169 496 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 CKMT2P17540 419 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 HNF1BP35680 557 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 ABCG1P45844 678 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3GQ6DHY5 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3CQ6IPX1 549 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TRNP1Q6NT89 227 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 GCNT7Q6ZNI0 430 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 ERICH1Q86X53 443 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D3Q8IZP1 549 aaPredicted RBP12.89□□□□□ -0.35
COPS7A-221ENST00000546229 PPP1R13BQ96KQ4 1090 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 RPRD1AQ96P16 312 aaPredicted RBP12.89□□□□□ -0.35
COPS7A-221ENST00000546229 NPY6RQ99463 290 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
COPS7A-221ENST00000546229 UCKL1Q9NWZ5 548 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 VPS51Q9UID3 782 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 ZFR2Q9UPR6 939 aaKnown RBP12.89□□□□□ -0.35
COPS7A-221ENST00000546229 CEP83Q9Y592 693 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 RAI2Q9Y5P3 530 aa12.89□□□□□ -0.35
COPS7A-221ENST00000546229 FLNBO75369 2602 aaKnown RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 SMAD6O43541 496 aaKnown RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 SIGLEC6O43699 453 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 LZTS3O60299 673 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 BRINP1O60477 761 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 SDC3O75056 442 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CLDN11O75508 207 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 ADCY5O95622 1261 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 PNMA6AP0CW24 399 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 PON1P27169 355 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CDH5P33151 784 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CLCN1P35523 988 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CXCR3P49682 368 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CDH4P55283 916 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms