RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 NMRAL1Q9HBL8 299 aa16.92■□□□□ 0.3
KDM2B-216ENST00000543025 CASS4Q9NQ75 786 aa16.92■□□□□ 0.3
KDM2B-216ENST00000543025 TCF7L2Q9NQB0 619 aa16.92■□□□□ 0.3
KDM2B-216ENST00000543025 ERI2A8K979 691 aaKnown RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 HUS1O60921 280 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 NPR3P17342 541 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 ERCC2P18074 760 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 AQP4P55087 323 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 RBBP5Q15291 538 aaKnown RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 TRIP10Q15642 601 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 HSP90AA5PQ58FG0 334 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 MAP3K21Q5TCX8 1036 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 KBTBD6Q86V97 674 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 MAPK15Q8TD08 544 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 SOCS4Q8WXH5 440 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 MFSD3Q96ES6 412 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 HNRNPABQ99729 332 aaKnown RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 CENPKQ9BS16 269 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 FAM49AQ9H0Q0 323 aaPredicted RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 LRRC4Q9HBW1 653 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 PIGVQ9NUD9 493 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 MID2Q9UJV3 735 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 RAD54BQ9Y620 910 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 SMIM28A0A1B0GU29 152 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 CASQ2O14958 399 aaPredicted RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 NCAM2O15394 837 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 XPOTO43592 962 aaKnown RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 C2P06681 752 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 GLDCP23378 1020 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 NUMBP49757 651 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 AIF1P55008 147 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 CSE1LP55060 971 aaKnown RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 MPP3Q13368 585 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 MSLNQ13421 630 aaPredicted RBP16.91■□□□□ 0.3
KDM2B-216ENST00000543025 DLG2Q15700 870 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 SV2CQ496J9 727 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 SYPL2Q5VXT5 272 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 KCNMB4Q86W47 210 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 SLC2A13Q96QE2 648 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 OSMRQ99650 979 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 SSX2IPQ9Y2D8 614 aa16.91■□□□□ 0.3
KDM2B-216ENST00000543025 MAGEB16A2A368 324 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 GPR32O75388 356 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 CDC42EP1Q00587 391 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 PPIDQ08752 370 aaKnown RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 PCBP1Q15365 356 aaKnown RBP eCLIP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 KCTD11Q693B1 232 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 LIMS2Q7Z4I7 341 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 SIX6OS1Q8N1H7 587 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 AGR3Q8TD06 166 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 KCTD13Q8WZ19 329 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 SLC9A7Q96T83 725 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 ILKAPQ9H0C8 392 aaPredicted RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 OXSMQ9NWU1 459 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 CEP350Q5VT06 3117 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 ZNF638Q14966 1978 aaKnown RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 ATP9BO43861 1147 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 BEST1O76090 585 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 SNUPNO95149 360 aaKnown RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 APOA4P06727 396 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 MMP3P08254 477 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 F7P08709 466 aaPredicted RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 PIM1P11309 404 aaPredicted RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 VCLP18206 1134 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 NDUFV1P49821 464 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 RPL26P61254 145 aaKnown RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 LIN52Q52LA3 116 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 RASIP1Q5U651 963 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 AP1ARQ63HQ0 302 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 EFCAB3Q8N7B9 438 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 OR52B2Q96RD2 323 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 GATA5Q9BWX5 397 aaPredicted RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 GBA3Q9H227 469 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 C20orf96Q9NUD7 363 aaPredicted RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
KDM2B-216ENST00000543025 KLK14Q9P0G3 267 aa16.9■□□□□ 0.3
KDM2B-216ENST00000543025 CASP8AP2Q9UKL3 1982 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.89■□□□□ 0.29
KDM2B-216ENST00000543025 FAM72CH0Y354 149 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 H3BNX3 289 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 CLDN5O00501 218 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 ZBTB24O43167 697 aaPredicted RBP16.89■□□□□ 0.29
KDM2B-216ENST00000543025 PEX1O43933 1283 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 LTFP02788 710 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 THRAP10827 490 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 CYP2C9P11712 490 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 CYP2B6P20813 491 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 ADRA1BP35368 520 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 RGS2P41220 211 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 TPI1P60174 286 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 MMEL1Q495T6 779 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 FAM72AQ5TYM5 149 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 FAM72DQ6L9T8 149 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 FAM72BQ86X60 149 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 NTAN1Q96AB6 310 aa16.89■□□□□ 0.29
KDM2B-216ENST00000543025 VPS39Q96JC1 886 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms