RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 GOLGA8JA6NMD2 632 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 MEIS3P2A8K0S8 358 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 KPNA7A9QM74 516 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 TMEM114B3SHH9 223 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 AP3B1O00203 1094 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 GFRA3O60609 400 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 CST8O60676 142 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 STAMBPO95630 424 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 ERBB2P04626 1255 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 SERPINE1P05121 402 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 SRGAP2CP0DJJ0 459 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 PYGBP11216 843 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 KRT3P12035 628 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 P4HA1P13674 534 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 ALOX15P16050 662 aaPredicted RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 TPSB2P20231 275 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 BGNP21810 368 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 KDELR1P24390 212 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 PSMA2P25787 234 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 AVPR2P30518 371 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 SSTR1P30872 391 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 ZNF132P52740 706 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 AQP5P55064 265 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 BCAR1P56945 870 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 BASP1P80723 227 aaKnown RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 SULT2A1Q06520 285 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 ILF2Q12905 390 aaKnown RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 DCTN2Q13561 401 aaKnown RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 KCNC3Q14003 757 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 KRT81Q14533 505 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 PDK3Q15120 406 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 TPSAB1Q15661 275 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 AMHR2Q16671 573 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 BOLA3Q53S33 107 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 ACBD5Q5T8D3 534 aaPredicted RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 FAXCQ5TGI0 409 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 DARS2Q6PI48 645 aaKnown RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 ZPBP2Q6X784 338 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 SH2D5Q6ZV89 423 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 TMEM173Q86WV6 379 aaPredicted RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 ANKMY2Q8IV38 441 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 CDKL3Q8IVW4 592 aaPredicted RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 ARID3BQ8IVW6 561 aaPredicted RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 FBXW8Q8N3Y1 598 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 GSDMBQ8TAX9 411 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 DEPTORQ8TB45 409 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 WDR60Q8WVS4 1066 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 FAM213AQ9BRX8 229 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 TMEM121Q9BTD3 319 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 ZNF696Q9H7X3 374 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 MINDY3Q9H8M7 445 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 PCMTD2Q9NV79 361 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 PRMT7Q9NVM4 692 aaPredicted RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 SPG21Q9NZD8 308 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 KANSL3Q9P2N6 904 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 SLC17A7Q9P2U7 560 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 ZC3H7BQ9UGR2 993 aaKnown RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 HBS1LQ9Y450 684 aaKnown RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 CNTNAP2Q9UHC6 1331 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 BCLAF3A2AJT9 711 aaKnown RBP10.62□□□□□ -0.71
CHFR-219ENST00000541341 C2orf71A6NGG8 1288 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 TRIM49D1C9J1S8 452 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 K7ERI5 159 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 ZNF701M0R085 212 aaPredicted RBP10.62□□□□□ -0.71
CHFR-219ENST00000541341 ACKR2O00590 384 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 CXCL14O95715 111 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 APOEP02649 317 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 EDN1P05305 212 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 UBTFL6P0CB48 400 aaPredicted RBP10.62□□□□□ -0.71
CHFR-219ENST00000541341 FAM200BP0CF97 657 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 RBP3P10745 1247 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 EPCAMP16422 314 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 AXLP30530 894 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 SERPINB6P35237 376 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 GJC1P36383 396 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 ELK3P41970 407 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 RANBP1P43487 201 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 NR2C2P49116 596 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 HDAC4P56524 1084 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 NUP107P57740 925 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 BST1Q10588 318 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 OVGP1Q12889 678 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 CHI3L2Q15782 390 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 KYAT1Q16773 422 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 KBTBD12Q3ZCT8 623 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 PGM2L1Q6PCE3 622 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 RFX6Q8HWS3 928 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 CTAGE3PQ8IX95 158 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 SLC39A11Q8N1S5 342 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 BCL7CQ8WUZ0 217 aaPredicted RBP10.62□□□□□ -0.71
CHFR-219ENST00000541341 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 FAF2Q96CS3 445 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 PANX3Q96QZ0 392 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 CDCA3Q99618 268 aaPredicted RBP10.62□□□□□ -0.71
CHFR-219ENST00000541341 EFHD1Q9BUP0 239 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 KIFC3Q9BVG8 833 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 ELAC1Q9H777 363 aaKnown RBP10.62□□□□□ -0.71
CHFR-219ENST00000541341 RBAKQ9NYW8 714 aaPredicted RBP10.62□□□□□ -0.71
CHFR-219ENST00000541341 LIMD1Q9UGP4 676 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 ADAM28Q9UKQ2 775 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms