RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 BZW2Q9Y6E2 419 aaKnown RBP15.44■□□□□ 0.06
UBE3B-212ENST00000540230 ILVBLA1L0T0 632 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 SMAD6O43541 496 aaKnown RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ZMPSTE24O75844 475 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 RHOQP17081 205 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 HNRNPH3P31942 346 aaKnown RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ACVRL1P37023 503 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 NNMTP40261 264 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 PSMD8P48556 350 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 VASPP50552 380 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 IRX4P78413 519 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 GNA12Q03113 381 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 SEMA3BQ13214 749 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 CA9Q16790 459 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ACCSLQ4AC99 568 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 EFHC2Q5JST6 749 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 CYP4V2Q6ZWL3 525 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ARHGEF26Q96DR7 871 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 SPON2Q9BUD6 331 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 PABPC3Q9H361 631 aaKnown RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 C6orf106Q9H6K1 298 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 TMEM248Q9NWD8 314 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 NENFQ9UMX5 172 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 HS3ST2Q9Y278 367 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 SLCO1B1Q9Y6L6 691 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 PCDH15Q96QU1 1955 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 A0A1W2PP55 124 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 PRR5-ARHGAP8B1AHC4 643 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 CREB3O43889 395 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 OXTRP30559 389 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 L1CAMP32004 1257 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 KRT83P78385 493 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ARF5P84085 180 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ARHGAP8P85298 464 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ZBTB16Q05516 673 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 TRIM61Q5EBN2 209 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 AADATQ8N5Z0 425 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 PPP1R9BQ96SB3 815 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 SNRNP25Q9BV90 132 aaKnown RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 EDEM2Q9BV94 578 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 C2orf49Q9BVC5 232 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 ATP13A1Q9HD20 1204 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 PCSK1NQ9UHG2 260 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 CDV3Q9UKY7 258 aaKnown RBP15.43■□□□□ 0.06
UBE3B-212ENST00000540230 SARDHQ9UL12 918 aa15.43■□□□□ 0.06
UBE3B-212ENST00000540230 RNF103O00237 685 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 CBX4O00257 560 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 PLK4O00444 970 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 KHNYNO15037 678 aaKnown RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 BNIP3LO60238 219 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 LRCH4O75427 683 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 CD160O95971 181 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 MYBL1P10243 752 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 TCF4P15884 667 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 EPHB2P29323 1055 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 SLC8A1P32418 973 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 EIF4A3P38919 411 aaKnown RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 GFPT1Q06210 699 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 ELAVL3Q14576 367 aaKnown RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 TTC31Q49AM3 519 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 DCAF12L1Q5VU92 463 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 ALKBH5Q6P6C2 394 aaKnown RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 ZNF783Q6ZMS7 281 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 RGL4Q8IZJ4 473 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 ATP11CQ8NB49 1132 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 NETO1Q8TDF5 533 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 FNIP1Q8TF40 1166 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 ARHGEF2Q92974 986 aaKnown RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 TRIM11Q96F44 468 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 BTBD6Q96KE9 485 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 DNAJC7Q99615 494 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 ACE2Q9BYF1 805 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 BTBD1Q9H0C5 482 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 NEUROG2Q9H2A3 272 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 NOL6Q9H6R4 1146 aaKnown RBP15.42■□□□□ 0.06
UBE3B-212ENST00000540230 FBXL12Q9NXK8 326 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 SCINQ9Y6U3 715 aa15.42■□□□□ 0.06
UBE3B-212ENST00000540230 METTL12A8MUP2 240 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 MEI4A8MW99 385 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 RNASEH1O60930 286 aaKnown RBP15.41■□□□□ 0.06
UBE3B-212ENST00000540230 ZNF821O75541 412 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-212ENST00000540230 SEMA4FO95754 770 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 IL1BP01584 269 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 CTSLP07711 333 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 MIPP30301 263 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 DRD3P35462 400 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 MAPKAPK2P49137 400 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 ADKP55263 362 aaKnown RBP15.41■□□□□ 0.06
UBE3B-212ENST00000540230 POM121L1PQ3SYA9 428 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 IL31Q6EBC2 164 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 SLC23A3Q6PIS1 610 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 VPS36Q86VN1 386 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 CADM4Q8NFZ8 388 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 DNASE2BQ8WZ79 361 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 FOXJ1Q92949 421 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 TNKS2Q9H2K2 1166 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 EVLQ9UI08 416 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-212ENST00000540230 AP4E1Q9UPM8 1137 aa15.41■□□□□ 0.06
UBE3B-212ENST00000540230 DCDC2BA2VCK2 349 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms