RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 ZNF134P52741 427 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 LIMK1P53667 647 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 ALDH18A1P54886 795 aaKnown RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 RIPK4P57078 832 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 IRX6P78412 446 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 PREPLQ4J6C6 727 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 FAM102AQ5T9C2 384 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 AGAP9Q5VTM2 703 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 TCTN3Q6NUS6 607 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 NFRKBQ6P4R8 1299 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 C19orf48Q6RUI8 117 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 TMEM108Q6UXF1 575 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 POLNQ7Z5Q5 900 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 RASGRP3Q8IV61 690 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 FTSJ3Q8IY81 847 aaKnown RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 FUKQ8N0W3 1084 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 FAM133AQ8N9E0 248 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 TDRD5Q8NAT2 981 aaKnown RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 ZBTB44Q8NCP5 570 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 NAXEQ8NCW5 288 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 OR56A1Q8NGH5 318 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 POC1BQ8TC44 478 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 SPATA18Q8TC71 538 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 OTUD7AQ8TE49 926 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 GRAMD1AQ96CP6 724 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 NEK1Q96PY6 1258 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 MED15Q96RN5 788 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 SLC25A32Q9H2D1 315 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 ZHX3Q9H4I2 956 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 POMKQ9H5K3 350 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 HELLSQ9NRZ9 838 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 DNMT3BQ9UBC3 853 aaKnown RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 HSFX1Q9UBD0 423 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 CDH22Q9UJ99 828 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 ZFR2Q9UPR6 939 aaKnown RBP4.42□□□□□ -1.7
SNHG1-203ENST00000537024 HPSEQ9Y251 543 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 HS3ST4Q9Y661 456 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 GREB1Q4ZG55 1949 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 CFAP46Q8IYW2 2715 aa4.42□□□□□ -1.7
SNHG1-203ENST00000537024 NAV1Q8NEY1 1877 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 A0A1B0GTW7 788 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 DIRC3C9JPN6 131 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 E7ENX8 843 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 hCG_1984214I3L0E3 225 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 EPB41L2O43491 1005 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 FLOT1O75955 427 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 ACTL6BO94805 426 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 KCNK5O95279 499 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 GPANK1O95872 356 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 TOP3BO95985 862 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 VIPP01282 170 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 HLA-DOAP06340 250 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 DCNP07585 359 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 IFIT1P09914 478 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 ZSCAN22P10073 491 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 HSPA5P11021 654 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 KCNA2P16389 499 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 FGFR4P22455 802 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 MST1P26927 711 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 COPB2P35606 906 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 HSD11B2P80365 405 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 TAP2Q03519 686 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 MYO1EQ12965 1108 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 GPS1Q13098 491 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 DDX10Q13206 875 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 CNGB1Q14028 1251 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 E2F2Q14209 437 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 TRIM71Q2Q1W2 868 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 ZIK1Q3SY52 487 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 LRRC24Q50LG9 513 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 SPECC1Q5M775 1068 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 FBXO47Q5MNV8 452 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 ATPAF1Q5TC12 328 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 MANEALQ5VSG8 457 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 METRNLQ641Q3 311 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 SYCE2Q6PIF2 218 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 RBM23Q86U06 439 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 MOGAT3Q86VF5 341 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 SYT8Q8NBV8 401 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 PPHLN1Q8NEY8 458 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 ATRIPQ8WXE1 791 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 NELL1Q92832 810 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 TOP1MTQ969P6 601 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 LRIG1Q96JA1 1093 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 ZNF668Q96K58 619 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 FAM227BQ96M60 508 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 DCLRE1CQ96SD1 692 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 RBM15Q96T37 977 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 NELL2Q99435 816 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 NEU1Q99519 415 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 MNTQ99583 582 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 PYM1Q9BRP8 204 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 PTDSS2Q9BVG9 487 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 GPR87Q9BY21 358 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 ZCWPW1Q9H0M4 648 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 TBC1D17Q9HA65 648 aa4.41□□□□□ -1.7
SNHG1-203ENST00000537024 SEPSECSQ9HD40 501 aaKnown RBP4.41□□□□□ -1.7
SNHG1-203ENST00000537024 GPR108Q9NPR9 543 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms