RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TBC1D30Q9Y2I9 924 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MYLKQ15746 1914 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 FAM149AA5PLN7 773 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TRABD2BA6NFA1 517 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ENC1O14682 589 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MCF2LO15068 1137 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 EPHA8P29322 1005 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 NUDT1P36639 197 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 GGCXP38435 758 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CAMK2BQ13554 666 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MAN2A1Q16706 1144 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 C5orf22Q49AR2 442 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 Q6ZVU0 165 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 C14orf80Q86SX3 495 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 OXR1Q8N573 874 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SH2D3CQ8N5H7 860 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MFSD2AQ8NA29 543 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PIP4K2CQ8TBX8 421 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CNDP2Q96KP4 475 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MUC3BQ9H195 1237 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 WDCPQ9H6R7 721 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ERVMER34-1Q9H9K5 563 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PLCB1Q9NQ66 1216 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ARHGAP20Q9P2F6 1191 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 STAP1Q9ULZ2 295 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DMTF1Q9Y222 760 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 RAXQ9Y2V3 346 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PCDHGA1Q9Y5H4 931 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 OR51B4Q9Y5P0 310 aa20.21■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MAGEC1O60732 1142 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PNMA6AP0CW24 399 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 MAT2AP31153 395 aaKnown RBP20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 BPIFB4P59827 614 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 KRT83P78385 493 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CNTN1Q12860 1018 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 BRMS1LQ5PSV4 323 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 AGBL4Q5VU57 503 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TMPRSS12Q86WS5 348 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TRIM69Q86WT6 500 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 FAM114A1Q8IWE2 563 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 EID2Q8N6I1 236 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PDCD7Q8N8D1 485 aaKnown RBP20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 NPY6RQ99463 290 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TKTL2Q9H0I9 626 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PDCL3Q9H2J4 239 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PIGVQ9NUD9 493 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ARHGEF38Q9NXL2 777 aa20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 COL5A1P20908 1838 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1B-204ENST00000536782 BNIP3LO60238 219 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 C1SP09871 688 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CDK4P11802 303 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 RXRGP48443 463 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CXCR3P49682 368 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SULT1E1P49888 294 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 RNASE9P60153 205 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CYP4F3Q08477 520 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 STAT4Q14765 748 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 POM121L1PQ3SYA9 428 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 OTUD1Q5VV17 481 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 IQCHQ86VS3 1027 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 FAM71AQ8IYT1 594 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TMEM35BQ8NCS4 154 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 C2orf49Q9BVC5 232 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 NDST4Q9H3R1 872 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 HS3ST2Q9Y278 367 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 FARP1Q9Y4F1 1045 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PAXBP1Q9Y5B6 917 aa20.19■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CBX4O00257 560 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 RFPL3O75679 317 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CNTN5O94779 1100 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ADCY5O95622 1261 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 F9P00740 461 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 RHOCP08134 193 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SRCP12931 536 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 OVGP1Q12889 678 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 BNIP3Q12983 259 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 DNAJC3Q13217 504 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 COL28A1Q2UY09 1125 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SETMARQ53H47 684 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SPATS2Q86XZ4 545 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ATP11CQ8NB49 1132 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 NT5C3BQ969T7 300 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PGAP3Q96FM1 320 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CCDC114Q96M63 670 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PREBQ9HCU5 417 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TMEM51Q9NW97 253 aa20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 GCN1Q92616 2671 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1B-204ENST00000536782 E9PAM4 449 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PRAMEF26H0Y7S4 382 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TFE3P19532 575 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CDH5P33151 784 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 HNF1BP35680 557 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 GABRB2P47870 512 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 DEUP1Q05D60 604 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 RAPGEF1Q13905 1077 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 VWA3BQ502W6 1294 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ALFQ53S48 1182 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms