RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 A0A1W2PP55 124 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 LNP1A1A4G5 178 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 PRR5-ARHGAP8B1AHC4 643 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 RNF103O00237 685 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 PLK4O00444 970 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 TPM3P06753 285 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 TCF4P15884 667 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 OXTRP30559 389 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 HNRNPH3P31942 346 aaKnown RBP13.48□□□□□ -0.25
PRKDC-206ENST00000536429 EIF4A3P38919 411 aaKnown RBP13.48□□□□□ -0.25
PRKDC-206ENST00000536429 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-206ENST00000536429 ARF5P84085 180 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 ARHGAP8P85298 464 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 GNA12Q03113 381 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 ZBTB16Q05516 673 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 SEMA3BQ13214 749 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 CST6Q15828 149 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 ACCSLQ4AC99 568 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 EFHC2Q5JST6 749 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 PEAR1Q5VY43 1037 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-206ENST00000536429 AADATQ8N5Z0 425 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 BTBD6Q96KE9 485 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 C2orf49Q9BVC5 232 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-206ENST00000536429 C6orf106Q9H6K1 298 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-206ENST00000536429 NOL6Q9H6R4 1146 aaKnown RBP13.48□□□□□ -0.25
PRKDC-206ENST00000536429 TMEM248Q9NWD8 314 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 SARDHQ9UL12 918 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
PRKDC-206ENST00000536429 CBX4O00257 560 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 KHNYNO15037 678 aaKnown RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 CREB3O43889 395 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 BNIP3LO60238 219 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 LRCH4O75427 683 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ZNF821O75541 412 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 CD160O95971 181 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 MYBL1P10243 752 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 EPHB2P29323 1055 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 MIPP30301 263 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 L1CAMP32004 1257 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 SLC8A1P32418 973 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 NNMTP40261 264 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ADKP55263 362 aaKnown RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 KRT83P78385 493 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 GFPT1Q06210 699 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ELAVL3Q14576 367 aaKnown RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 POM121L1PQ3SYA9 428 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 TRIM61Q5EBN2 209 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 CCDC122Q5T0U0 273 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 DCAF12L1Q5VU92 463 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ALKBH5Q6P6C2 394 aaKnown RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 LEKR1Q6ZMV7 388 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ATP11CQ8NB49 1132 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 NETO1Q8TDF5 533 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 GANCQ8TET4 914 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ARHGEF2Q92974 986 aaKnown RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 KCTD15Q96SI1 283 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 DNAJC7Q99615 494 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 SNRNP25Q9BV90 132 aaKnown RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 PACSIN1Q9BY11 444 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ACE2Q9BYF1 805 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 RBSNQ9H1K0 784 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 NEUROG2Q9H2A3 272 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 TNKS2Q9H2K2 1166 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 ATP13A1Q9HD20 1204 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 FBXL12Q9NXK8 326 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 CDV3Q9UKY7 258 aaKnown RBP13.47□□□□□ -0.25
PRKDC-206ENST00000536429 SCINQ9Y6U3 715 aa13.47□□□□□ -0.25
PRKDC-206ENST00000536429 CACNA1AO00555 2505 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 DCDC2BA2VCK2 349 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 METTL12A8MUP2 240 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 MEI4A8MW99 385 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 RNASEH1O60930 286 aaKnown RBP13.46□□□□□ -0.25
PRKDC-206ENST00000536429 RNASEH2AO75792 299 aaKnown RBP13.46□□□□□ -0.25
PRKDC-206ENST00000536429 SEMA4FO95754 770 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 IL1BP01584 269 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 CYP1A2P05177 515 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 CTSLP07711 333 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 IL1R2P27930 398 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 DRD3P35462 400 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 MAPKAPK2P49137 400 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 ASTE1Q2TB18 679 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-206ENST00000536429 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-206ENST00000536429 STPG1Q5TH74 334 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 IL31Q6EBC2 164 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 VPS36Q86VN1 386 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 GAS2L3Q86XJ1 694 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 CPNE8Q86YQ8 564 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 HDDC3Q8N4P3 179 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 RTL3Q8N8U3 475 aaKnown RBP13.46□□□□□ -0.25
PRKDC-206ENST00000536429 NETO2Q8NC67 525 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 CHST14Q8NCH0 376 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 CADM4Q8NFZ8 388 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 OR8K1Q8NGG5 319 aa13.46□□□□□ -0.25
PRKDC-206ENST00000536429 OR2A12Q8NGT7 310 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms