RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MSLNQ13421 630 aaPredicted RBP18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 TRIQKQ629K1 86 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 WSCD1Q658N2 575 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 RAP1GAP2Q684P5 730 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 KRT73Q86Y46 540 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CYP4X1Q8N118 509 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 UXS1Q8NBZ7 420 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 TINF2Q9BSI4 451 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 PSME2Q9UL46 239 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CXCR2P25025 360 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 HNRNPH1P31943 449 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 SNX30Q5VWJ9 437 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 UNC93AQ86WB7 457 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 APLFQ8IW19 511 aaPredicted RBP18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CXorf40BQ96DE9 158 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CORO1BQ9BR76 489 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 EPB41L4BQ9H329 900 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 TMEM134Q9H6X4 195 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 EXO5Q9H790 373 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 SF3B1O75533 1304 aaKnown RBP eCLIP18.44■□□□□ 0.542e-7■■■■■ 215.4
SFSWAP-203ENST00000535236 GLI1P08151 1106 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 ANXA5P08758 320 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 NFKB1P19838 968 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 RBL1P28749 1068 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CYP2C18P33260 490 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CELF3Q5SZQ8 465 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 PLEKHA7Q6IQ23 1121 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 WDR59Q6PJI9 974 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 SNRNP27Q8WVK2 155 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CAVIN3Q969G5 261 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 OLFM1Q99784 485 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 IDI2Q9BXS1 227 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 OR12D3Q9UGF7 316 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 GNPTGQ9UJJ9 305 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 DNPEPQ9ULA0 475 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 FAM50BQ9Y247 325 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 MRPS23Q9Y3D9 190 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 BCLAF3A2AJT9 711 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 ANKRD63C9JTQ0 380 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 GNRH1P01148 92 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 HLA-DQA2P01906 255 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 PLK1P53350 603 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 INHBEP58166 350 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 VGLL4Q14135 290 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 CXCL17Q6UXB2 119 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 TMPRSS6Q8IU80 811 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 SCAIQ8N9R8 606 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 ERN1O75460 977 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 PDE5AO76074 875 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 RPL21P46778 160 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 MRPS6P82932 125 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 IRF8Q02556 426 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 MLPHQ9BV36 600 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 PORCNQ9H237 461 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 NINJ2Q9NZG7 142 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 RAB23Q9ULC3 237 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 PPIEQ9UNP9 301 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 INVSQ9Y283 1065 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 ARIH1Q9Y4X5 557 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 TSC22D2O75157 780 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 USP12O75317 370 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 FAM58BPP0C7Q3 252 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 CAMSAP1Q5T5Y3 1602 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 RAET1GQ6H3X3 334 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 DET1Q7L5Y6 550 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 OXNAD1Q96HP4 312 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 TMEM237Q96Q45 408 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 FHDC1Q9C0D6 1143 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 CD248Q9HCU0 757 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 SEMA4BQ9NPR2 832 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 RABGEF1Q9UJ41 708 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 GPSM3Q9Y4H4 160 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 C15orf38-AP3S2A0A0A6YYH1 394 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 RARAP10276 462 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 HDCP19113 662 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 UBA1P22314 1058 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 NEK3P51956 506 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 PFKPQ01813 784 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 NTRK3Q16288 839 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 TCHHL1Q5QJ38 904 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 ARMC4Q5T2S8 1044 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 ARPINQ7Z6K5 226 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 RIOX2Q8IUF8 465 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 CACTIN-AS1Q8N1I8 211 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 ASB8Q9H765 288 aa18.43■□□□□ 0.54
SFSWAP-203ENST00000535236 HIST1H2ABP04908 130 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 MAPK8P45983 427 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 GPR1P46091 355 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 HIST3H2AQ7L7L0 130 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 HIST1H2ACQ93077 130 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 SLC35C1Q96A29 364 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 COL26A1Q96A83 441 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 TCRBV5S4A2TA0A5A2 114 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 TRDMT1O14717 391 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 SGTAO43765 313 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 UBOX5O94941 541 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 PTPRAP18433 802 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 DPYSL3Q14195 570 aa18.42■□□□□ 0.54
SFSWAP-203ENST00000535236 PCID2Q5JVF3 399 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms