RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 I6L893 689 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-211ENST00000533492 KCNK3O14649 394 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 MCF2LO15068 1137 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 EPHB6O15197 1021 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 CHRNB2P17787 502 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 MMP8P22894 467 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 SDC4P31431 198 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 CCR5P51681 352 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 ADPRHP54922 357 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 ARL13BQ3SXY8 428 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 CCDC183Q5T5S1 534 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 TRNP1Q6NT89 227 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 LAYNQ6UX15 382 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 Q6ZVU0 165 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 TFAP2DQ7Z6R9 452 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 ZNF683Q8IZ20 524 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 EMC1Q8N766 993 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 SLC30A5Q8TAD4 765 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 RHBDD1Q8TEB9 315 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 CCDC114Q96M63 670 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 C11orf70Q9BRQ4 267 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 ORAI3Q9BRQ5 295 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 AASDHPPTQ9NRN7 309 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 PCOLCE2Q9UKZ9 415 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 TPX2Q9ULW0 747 aaKnown RBP15.84■□□□□ 0.13
CPSF1-211ENST00000533492 CABIN1Q9Y6J0 2220 aa15.84■□□□□ 0.13
CPSF1-211ENST00000533492 VILLO15195 856 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 ALOX15BO15296 676 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 FLRT2O43155 660 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 SNAP91O60641 907 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 PROS1P07225 676 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 SRCP12931 536 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 NSFP46459 744 aaKnown RBP15.83■□□□□ 0.12
CPSF1-211ENST00000533492 CDO1Q16878 200 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 UNQ6494/PRO21346Q6UXR6 183 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 PRPF39Q86UA1 669 aaKnown RBP15.83■□□□□ 0.12
CPSF1-211ENST00000533492 CHCHD4Q8N4Q1 142 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 PIP4K2CQ8TBX8 421 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 RXFP2Q8WXD0 754 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 SLC6A18Q96N87 628 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 SPON2Q9BUD6 331 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 ZYG11BQ9C0D3 744 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 KDM4CQ9H3R0 1056 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 SEPT11Q9NVA2 429 aaKnown RBP15.83■□□□□ 0.12
CPSF1-211ENST00000533492 VPS51Q9UID3 782 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 SARDHQ9UL12 918 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 PPM1HQ9ULR3 514 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 APOBEC2Q9Y235 224 aaKnown RBP15.83■□□□□ 0.12
CPSF1-211ENST00000533492 HS3ST2Q9Y278 367 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 NEUROG3Q9Y4Z2 214 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 CEP295Q9C0D2 2601 aa15.83■□□□□ 0.12
CPSF1-211ENST00000533492 IGLV3-10A0A075B6K4 115 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 A0A0D9SEW6 157 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 ILVBLA1L0T0 632 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 LRRC10BA6NIK2 292 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 C1QTNF9BB2RNN3 333 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 H0Y8X5 98 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 PLK4O00444 970 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 SLC7A4O43246 635 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 DFNA5O60443 496 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 CBFA2T3O75081 653 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 ENDOD1O94919 500 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 MT-CO1P00395 513 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 FTH1P19P0C7X4 201 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 C1QTNF9P0C862 333 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 KRT3P12035 628 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 CD38P28907 300 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 DRD3P35462 400 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 CTSKP43235 329 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 CCT8P50990 548 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 CCDC15Q0P6D6 951 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 C15orf59Q2T9L4 293 aaPredicted RBP15.82■□□□□ 0.12
CPSF1-211ENST00000533492 POM121L1PQ3SYA9 428 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 SLC45A4Q5BKX6 768 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 DBX2Q6ZNG2 339 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 BNIPLQ7Z465 357 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 DCAF4L2Q8NA75 395 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 SERAC1Q96JX3 654 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 PSMB7Q99436 277 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 CDC6Q99741 560 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 SELENOOQ9BVL4 669 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 NAT10Q9H0A0 1025 aaKnown RBP15.82■□□□□ 0.12
CPSF1-211ENST00000533492 EBF2Q9HAK2 575 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 ADAM22Q9P0K1 906 aa15.82■□□□□ 0.12
CPSF1-211ENST00000533492 K7ERQ8 282 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 CBX4O00257 560 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 RTN2O75298 545 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 KRT37O76014 449 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 UNGP13051 313 aaPredicted RBP15.81■□□□□ 0.12
CPSF1-211ENST00000533492 RRM1P23921 792 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 CHRNA3P32297 505 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 ADRA1BP35368 520 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 RECQLP46063 649 aaPredicted RBP15.81■□□□□ 0.12
CPSF1-211ENST00000533492 CLCN6P51797 869 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 METAP1P53582 386 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 CNTN1Q12860 1018 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 CCDC14Q49A88 953 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 KCNT1Q5JUK3 1230 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 RETSATQ6NUM9 610 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 LINGO4Q6UY18 593 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms