RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 POLR2DO15514 142 aaKnown RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 ATP9BO43861 1147 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 GJB6O95452 261 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 CSF2P04141 144 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 CENPBP07199 599 aaPredicted RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 SETSIPP0DME0 302 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 PDIA4P13667 645 aaKnown RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 PRLRP16471 622 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 SYT1P21579 422 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 HNRNPA2B1P22626 353 aaKnown RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 AKT2P31751 481 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 PDX1P52945 283 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 PLK1P53350 603 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 HNRNPKP61978 463 aaKnown RBP eCLIP8.03□□□□□ -1.12
NXF1-215ENST00000533440 SULT2A1Q06520 285 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ZNF177Q13360 481 aaPredicted RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 NNTQ13423 1086 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 STK38Q15208 465 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 NFIL3Q16649 462 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 CDKN3Q16667 212 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ZNF284Q2VY69 593 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 PIP5KL1Q5T9C9 394 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 KRT39Q6A163 491 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 GUSBP11Q6P575 273 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 CLEC18BQ6UXF7 455 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 USP53Q70EK8 1073 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 INTS8Q75QN2 995 aaKnown RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 EFL1Q7Z2Z2 1120 aaKnown RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 HORMAD1Q86X24 394 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 DCP2Q8IU60 420 aaKnown RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 CLEC18CQ8NCF0 446 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ZNF548Q8NEK5 533 aaPredicted RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 FAM174AQ8TBP5 190 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 SEMA4DQ92854 862 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 KLK6Q92876 244 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ARRDC3Q96B67 414 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 MYOCQ99972 504 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ARHGAP9Q9BRR9 750 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 CALN1Q9BXU9 219 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 FZD3Q9NPG1 666 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 HESX1Q9UBX0 185 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 SALL4Q9UJQ4 1053 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ACSL6Q9UKU0 697 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 TRAF3IP3Q9Y228 551 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 PCDHGA7Q9Y5G6 932 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 MYO9AB2RTY4 2548 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 SPTAN1Q13813 2472 aaKnown RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 CPED1A4D0V7 1026 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 C1QTNF3-AMACRE9PGA6 284 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 O00370 1275 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 CASC3O15234 703 aaKnown RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 CALUO43852 315 aaPredicted RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 CUTAO60888 179 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 LTFP02788 710 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 FYNP06241 537 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 FAM87AP0C7U9 286 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 LCP1P13796 627 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 NME1P15531 152 aaKnown RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 CR2P20023 1033 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 GTF2H1P32780 548 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 AFMP43652 599 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 CLDN2P57739 230 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 TLE1Q04724 770 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 FZD2Q14332 565 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 C8orf34Q49A92 452 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 ZNF542PQ5EBM4 170 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 PERM1Q5SV97 790 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 Q6ZSR6 202 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 EFCAB3Q8N7B9 438 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 FBXL13Q8NEE6 735 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 WDR48Q8TAF3 677 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 UBA3Q8TBC4 463 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 DQX1Q8TE96 717 aaKnown RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 SLC35F5Q8WV83 523 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 ERCC4Q92889 916 aaPredicted RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 EEF2KMTQ96G04 330 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 LIN37Q96GY3 246 aaPredicted RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 BMFQ96LC9 184 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 SERPINB11Q96P15 392 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 ZSCAN16Q9H4T2 348 aaPredicted RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 MMRN2Q9H8L6 949 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 IGSF5Q9NSI5 407 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 DNAJC28Q9NX36 388 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 RAB20Q9NX57 234 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 SEPT3Q9UH03 358 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 XPO7Q9UIA9 1087 aaKnown RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 ZFR2Q9UPR6 939 aaKnown RBP8.02□□□□□ -1.13
NXF1-215ENST00000533440 MTMR6Q9Y217 621 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 TLR6Q9Y2C9 796 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 HS3ST3A1Q9Y663 406 aa8.02□□□□□ -1.13
NXF1-215ENST00000533440 SPTY2D1-AS1A0A0U1RR47 76 aa8.01□□□□□ -1.13
NXF1-215ENST00000533440 A6NNZ2 444 aa8.01□□□□□ -1.13
NXF1-215ENST00000533440 NTN3O00634 580 aaPredicted RBP8.01□□□□□ -1.13
NXF1-215ENST00000533440 TPP1O14773 563 aa8.01□□□□□ -1.13
NXF1-215ENST00000533440 PLD2O14939 933 aa8.01□□□□□ -1.13
NXF1-215ENST00000533440 ATMINO43313 823 aaPredicted RBP8.01□□□□□ -1.13
NXF1-215ENST00000533440 AQP9O43315 295 aa8.01□□□□□ -1.13
NXF1-215ENST00000533440 PPFIA2O75334 1257 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms