RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ITGA2BP08514 1039 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 MBL2P11226 248 aaPredicted RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 PTGIRP43119 386 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 NR2C2P49116 596 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 RAP1GDS1P52306 607 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 CDK16Q00536 496 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 TAF2Q6P1X5 1199 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 TTC23LQ6PF05 361 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 TMC7Q7Z402 723 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 LPCAT1Q8NF37 534 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 DQX1Q8TE96 717 aaKnown RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 CENPTQ96BT3 561 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 CDHR5Q9HBB8 845 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 STARD7Q9NQZ5 370 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 HMGXB4Q9UGU5 601 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 SLC27A5Q9Y2P5 690 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 RPTORQ8N122 1335 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 UNCXA6NJT0 531 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 C2orf81A6NN90 581 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 ZNF197O14709 1029 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 PQBP1O60828 265 aaKnown RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 PARNO95453 639 aaKnown RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 ARL2P36404 184 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 PTDSS1P48651 473 aaKnown RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 GDF10P55107 478 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 NEPROQ6NW34 567 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 FITM2Q8N6M3 262 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 SLC43A3Q8NBI5 491 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 PIWIL2Q8TC59 973 aaKnown RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 CAPSLQ8WWF8 208 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 EBNA1BP2Q99848 306 aaKnown RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 ECSITQ9BQ95 431 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 GGA2Q9UJY4 613 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 APPL1Q9UKG1 709 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 ST3GAL5Q9UNP4 418 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 EFR3BQ9Y2G0 817 aa12.44□□□□□ -0.42
BDNF-218ENST00000533246 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
BDNF-218ENST00000533246 NRCAMQ92823 1304 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 ATXN2Q99700 1313 aaKnown RBP12.43□□□□□ -0.42
BDNF-218ENST00000533246 TAF4O00268 1085 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 TREHO43280 583 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PEX1O43933 1283 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 KRT36O76013 467 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 GLP2RO95838 553 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PGAM1P18669 254 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 CD52P31358 61 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 UBAP2LQ14157 1087 aaKnown RBP12.43□□□□□ -0.42
BDNF-218ENST00000533246 ANO7Q6IWH7 933 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 ZDHHC24Q6UX98 284 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 NEK10Q6ZWH5 1172 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 C11orf74Q86VG3 221 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PLD5Q8N7P1 536 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 ASPSCR1Q9BZE9 553 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SLC7A5P2Q9GIP4 190 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SENP6Q9GZR1 1112 aaPredicted RBP12.43□□□□□ -0.42
BDNF-218ENST00000533246 SMIM28A0A1B0GU29 152 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 TRPC5OSA6NMA1 111 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 VNN1O95497 513 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SERPINF2P08697 491 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 OR4Q2P0C623 313 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 AKR1A1P14550 325 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 RGS4P49798 205 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 RENBPP51606 427 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 OXCT1P55809 520 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 DSG1Q02413 1049 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 GTF2H3Q13889 308 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 CERCAMQ5T4B2 595 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 XYLT1Q86Y38 959 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 ZNF786Q8N393 782 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SNX31Q8N9S9 440 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 OSCP1Q8WVF1 389 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 CERS2Q96G23 380 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 VPS50Q96JG6 964 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 COLEC11Q9BWP8 271 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 WWOXQ9NZC7 414 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PKD2L2Q9NZM6 624 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SLC13A4Q9UKG4 626 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 HTR3EA5X5Y0 456 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 UBDO15205 165 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 B4GALT4O60513 344 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SERPINI2O75830 405 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SOAT2O75908 522 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 APOA4P06727 396 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 EPHA3P29320 983 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PPP3CCP48454 512 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PPIL2Q13356 520 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 RIPK1Q13546 671 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 ARHGEF7Q14155 803 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 DDR2Q16832 855 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PARP6Q2NL67 630 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SLC10A6Q3KNW5 377 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 PPM1JQ5JR12 505 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SCIMPQ6UWF3 145 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 HSFY1Q96LI6 401 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 SEPHS2Q99611 448 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 DPEP3Q9H4B8 488 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 CCDC134Q9H6E4 229 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms