RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 NOS2P35228 1153 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 KRT9P35527 623 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 NUDT1P36639 197 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 GGCXP38435 758 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 RXRGP48443 463 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 SNX16P57768 344 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 SLC6A3Q01959 620 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 CNTN1Q12860 1018 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 C5orf22Q49AR2 442 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 IQCHQ86VS3 1027 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 SH2D3CQ8N5H7 860 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 ZNF397Q8NF99 534 aaPredicted RBP13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 SIK2Q9H0K1 926 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 SIX2Q9NPC8 291 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 DNAJC12Q9UKB3 198 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 DMTF1Q9Y222 760 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D30Q9Y2I9 924 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 E9PAM4 449 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 C1QTNF3-AMACRE9PGA6 284 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 MCF2LO15068 1137 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 CNTN5O94779 1100 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 C1SP09871 688 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 CDK4P11802 303 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 ZNF18P17022 549 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 MAT2AP31153 395 aaKnown RBP13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 CLCN1P35523 988 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 MTIF2P46199 727 aaKnown RBP13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 CXCR3P49682 368 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 CDH4P55283 916 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 OVGP1Q12889 678 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 BNIP3Q12983 259 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 DNAJC3Q13217 504 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 POM121L1PQ3SYA9 428 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 PTPN20Q4JDL3 420 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 AGBL4Q5VU57 503 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 Q6ZVU0 165 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 SLC47A2Q86VL8 602 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 TRIM69Q86WT6 500 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 FAM71AQ8IYT1 594 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 OXR1Q8N573 874 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 PIP4K2CQ8TBX8 421 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 TSC1Q92574 1164 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 SYNCQ9H7C4 482 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 PIGVQ9NUD9 493 aa13.15□□□□□ -0.3
TM9SF1-211ENST00000531406 LAMA5O15230 3695 aa13.15□□□□□ -0.31
TM9SF1-211ENST00000531406 BNIP3LO60238 219 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 RFPL3O75679 317 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 ADCY5O95622 1261 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 MT-CO1P00395 513 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 PNMA6AP0CW24 399 aaPredicted RBP13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 SRCP12931 536 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 JUPP14923 745 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 TFE3P19532 575 aaPredicted RBP13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 ACADVLP49748 655 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 CLDN6P56747 220 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 STX1AQ16623 288 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 SFMBT2Q5VUG0 894 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 KANSL1Q7Z3B3 1105 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 ZDHHC17Q8IUH5 632 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 MLKLQ8NB16 471 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 PSMB7Q99436 277 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 NPY6RQ99463 290 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 MUC3BQ9H195 1237 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 WDCPQ9H6R7 721 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 PLCB1Q9NQ66 1216 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 ARHGEF38Q9NXL2 777 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 RRN3Q9NYV6 651 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 HS3ST2Q9Y278 367 aa13.14□□□□□ -0.31
TM9SF1-211ENST00000531406 A0A087WV48 116 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 DRGXA6NNA5 263 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 PRAMEF26H0Y7S4 382 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 I6L893 689 aaPredicted RBP13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 K7ERQ8 282 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 SNAP91O60641 907 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 CTSLP07711 333 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 RHOCP08134 193 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 HNF1BP35680 557 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 TAS2R38P59533 333 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 BPIFB4P59827 614 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 KRT83P78385 493 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 STAT4Q14765 748 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 SETMARQ53H47 684 aaPredicted RBP13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 SOWAHCQ53LP3 525 aaPredicted RBP13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 ALFQ53S48 1182 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 DPY19L2P1Q6NXN4 242 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 ZNF683Q8IZ20 524 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 ATP11CQ8NB49 1132 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 TMEM35BQ8NCS4 154 aa13.13□□□□□ -0.31
TM9SF1-211ENST00000531406 OR2A12Q8NGT7 310 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms